CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46125	Soybean	mitochondrion, nucleus	68.63	52.84
KRH58007	Soybean	nucleus	8.49	25.56
KRH55141	Soybean	cytosol, mitochondrion, nucleus, plastid	14.39	25.16
KRG90046	Soybean	nucleus	7.75	23.33
PGSC0003DMT400022469	Potato	nucleus	25.83	21.6
Solyc01g009190.1.1	Tomato	nucleus	29.15	17.87
GSMUA_Achr4P21490_001	Banana	nucleus	23.25	16.03
KRH63090	Soybean	nucleus	7.75	13.46
KRH22885	Soybean	cytosol, mitochondrion, nucleus, plastid	18.08	12.47
KRH25014	Soybean	cytosol, nucleus, plastid	18.08	12.22
KRH62980	Soybean	nucleus	8.86	12.06
KRH29911	Soybean	cytosol, nucleus, plastid	18.08	11.92
KRH26403	Soybean	cytosol, mitochondrion, nucleus, plastid	17.34	11.44
KRH57881	Soybean	nucleus	20.66	11.11
KRH30959	Soybean	mitochondrion	11.07	10.87
KRG96921	Soybean	nucleus	19.19	9.67
KRH68665	Soybean	nucleus	19.19	9.65
KRH01275	Soybean	nucleus	11.81	9.58
KRH62246	Soybean	nucleus	12.55	9.47
KRH52961	Soybean	nucleus	12.55	9.37
KRH73012	Soybean	nucleus	8.49	7.88
KRH15123	Soybean	nucleus	13.28	7.84

Protein Annotations

EMBL:ACUP02010923	EnsemblPlants:KRG98822	EnsemblPlantsGene:GLYMA_18G100700	Gene3D:3.30.160.20	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR014720	InterPro:dsRBD_dom	PANTHER:PTHR10910	PANTHER:PTHR10910:SF143
PFAM:PF00035	PFscan:PS50137	ProteinID:KRG98822	ProteinID:KRG98822.1	SEG:seg	SUPFAM:SSF54768
UniParc:UPI0002948F7D	UniProt:K7MR08	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:10643985..10647662

Molecular Weight (calculated)

30225.7 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.552

Length

271 amino acids

Sequence
(BLAST)

001: MERERAGHQR KWGLPRYSGM KDGPDHIRKA SVYVNCVSFT SGAFSSLKEA NNQAAMLAFL SFSSGSSTQT SEHDTREQIG EVKPQDIPIP AQSSVIIDER
101: TLSQTKNKTM QAGSPHMPTF FSTVEVEGVE FHGKGGRSKK QSEENATKIA YIALKECGLN MHAAFSPIQI ENKVVQSIYN SDIVKWIKNL KLEDELLDLD
201: LNETSLANVK VSNEMHNPPF IQSPEEEMMI NRSSSSCEPS SKAETPTSSY LLCSRFKLHT CFPNIPFDKD L

Best Arabidopsis Sequence Match ( AT3G26932.1 )
(BLAST)

001: MYKNQLQELA QRSCFSLPSY TCTREGPDHA PRFKASVNFN GEIFESPTYC STLRQAEHSA AEVALSALSS KGPSKSLTAR VLDETGIYKN LLQETAHRAG
101: LDLPVYTSVR SGPGHIPTFS CTVELAGMSF NGESAKTKKQ AEKNAAIAAW FSLRKMPRLD PLRGEEKEQE IVARVLSRFR PKEVKRREPN QSRRRTVIRT
201: IRQNTTTTTT TTGDLLCEKL RSINLYTNEA SSSSPPPQRF WPSRTNLTQE QSKVKSLLEK CQEYAEKKQS LDDPKPEMRI KTSSPSPLSS SVERNCYSKL
301: LPFPSFVLNH QKLAPAVHIR SVIPVCSAPP PKPNPNPNSS PFITRELGNG SQEKKSLPN

Arabidopsis Description

DRB3Double-stranded RNA-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJF5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.