CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30959	Soybean	mitochondrion	73.05	88.41
KRH63090	Soybean	nucleus	19.46	41.67
KRH62980	Soybean	nucleus	23.65	39.7
VIT_14s0006g01440.t01	Wine grape	nucleus	34.13	34.23
PGSC0003DMT400088113	Potato	nucleus	16.17	31.4
Solyc03g118950.1.1	Tomato	cytosol, nucleus, plastid	18.26	30.81
PGSC0003DMT400014406	Potato	nucleus	18.56	28.7
PGSC0003DMT400085647	Potato	cytosol, nucleus	22.46	28.3
GSMUA_Achr2P22850_001	Banana	cytosol	25.75	27.83
KRH55141	Soybean	cytosol, mitochondrion, nucleus, plastid	12.57	27.1
KRG90046	Soybean	nucleus	7.19	26.67
KRH58007	Soybean	nucleus	6.89	25.56
TraesCS6A01G172500.1	Wheat	cytosol	21.26	25.0
KRH73012	Soybean	nucleus	21.26	24.32
KRH15123	Soybean	nucleus	33.23	24.18
TraesCS6D01G161700.2	Wheat	nucleus	21.26	23.51
TraesCS6B01G200200.1	Wheat	nucleus	20.96	23.1
Os08t0384100-01	Rice	cytosol	20.66	22.12
EES14943	Sorghum	nucleus	18.86	21.14
KRH62246	Soybean	nucleus	19.16	17.83
KRH52961	Soybean	nucleus	19.16	17.63
Zm00001d032326_P002	Maize	cytosol, plastid	18.86	17.4
KRH57881	Soybean	nucleus	19.76	13.1
KRH22885	Soybean	cytosol, mitochondrion, nucleus, plastid	14.97	12.72
KRH26403	Soybean	cytosol, mitochondrion, nucleus, plastid	15.27	12.41
KRH25014	Soybean	cytosol, nucleus, plastid	14.67	12.22
KRH46125	Soybean	mitochondrion, nucleus	12.87	12.22
KRG98822	Soybean	nucleus	9.58	11.81
KRH29911	Soybean	cytosol, nucleus, plastid	14.37	11.68
KRG96921	Soybean	nucleus	16.47	10.22
KRH68665	Soybean	nucleus	16.17	10.02
EES09107	Sorghum	cytosol	8.38	7.76
Zm00001d052326_P001	Maize	cytosol	8.38	7.76
TraesCS5A01G149300.1	Wheat	cytosol, plastid	7.78	7.56
TraesCS5B01G148000.1	Wheat	plastid	7.78	7.56

Protein Annotations

EMBL:ACUP02011509	EnsemblPlants:KRH01275	EnsemblPlantsGene:GLYMA_18G266300	Gene3D:3.30.160.20	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR014720	InterPro:dsRBD_dom	PANTHER:PTHR11207	PANTHER:PTHR11207:SF8
PFAM:PF00035	PFscan:PS50137	ProteinID:KRH01275	ProteinID:KRH01275.1	SEG:seg	SMART:SM00358
SUPFAM:SSF54768	UniParc:UPI0006EE05E6	UniProt:A0A0R0FFD8	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr18:-:55071421..55074175

Molecular Weight (calculated)

35786.3 Da

IEP (calculated)

9.890

GRAVY (calculated)

-0.476

Length

334 amino acids

Sequence
(BLAST)

001: MDTPQFNASS SNISPSPSPQ QPSPPIPVAY QPQSQPLSSS SASLPPGLPD APYKTRLQSF TQKCNISLPM YINVNEGRQH DPKFRSTVWV DGMKYTSPNT
101: FSRLRAAEAD VARMALENLH VKFKTKERPV THENTTLSKS ILHEYAAKLK VEKPAYNTGT TYVGDAARSK KEAEQLAARN AITSILDGAT SGLLYETIKS
201: KYSTFGAVRS TKSECINASS ATVKHVPSLV AVPVAANGNE TKVALPVPSF NQECQMREHV SSVQAITITE VPNLNLLPGP EQSTAGVSCE LSIGIGSGAL
301: SIGDGSRELS VGDGSGSKKR KRNKSKANKK LGLE

Best Arabidopsis Sequence Match ( AT1G09700.2 )
(BLAST)

001: MTSTDVSSGV SNCYVFKSRL QEYAQKYKLP TPVYEIVKEG PSHKSLFQST VILDGVRYNS LPGFFNRKAA EQSAAEVALR ELAKSSELSQ CVSQPVHETG
101: LCKNLLQEYA QKMNYAIPLY QCQKVETLGR VTQFTCTVEI GGIKYTGAAT RTKKDAEISA GRTALLAIQS DTKNNLANYN TQLTVLPCEK KTIQAAIPLK
201: ETVKTLKARK AQFKKKAQKG KRTVAKNPED IIIPPQPTDH CQNDQSEKIE TTPNLEPSSC MNGLKEAAFG SVETEASHA

Arabidopsis Description

DRB1Double-stranded RNA-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04492]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.