CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63090	Soybean	nucleus	74.37	94.87
Solyc03g118950.1.1	Tomato	cytosol, nucleus, plastid	32.66	32.83
KRH15123	Soybean	nucleus	74.87	32.46
PGSC0003DMT400088113	Potato	nucleus	26.13	30.23
KRH73012	Soybean	nucleus	42.71	29.11
KRH55141	Soybean	cytosol, mitochondrion, nucleus, plastid	22.61	29.03
PGSC0003DMT400014406	Potato	nucleus	30.65	28.24
VIT_14s0006g01440.t01	Wine grape	nucleus	45.73	27.33
KRG90046	Soybean	nucleus	11.06	24.44
KRH58007	Soybean	nucleus	11.06	24.44
KRH01275	Soybean	nucleus	39.7	23.65
KRH30959	Soybean	mitochondrion	32.66	23.55
PGSC0003DMT400085647	Potato	cytosol, nucleus	30.65	23.02
GSMUA_Achr2P22850_001	Banana	cytosol	35.68	22.98
EES14943	Sorghum	nucleus	33.67	22.48
TraesCS6A01G172500.1	Wheat	cytosol	31.66	22.18
TraesCS6D01G161700.2	Wheat	nucleus	32.16	21.19
TraesCS6B01G200200.1	Wheat	nucleus	31.66	20.79
Os08t0384100-01	Rice	cytosol	31.16	19.87
Zm00001d032326_P002	Maize	cytosol, plastid	31.16	17.13
KRH62246	Soybean	nucleus	27.64	15.32
KRH52961	Soybean	nucleus	27.64	15.15
KRH25014	Soybean	cytosol, nucleus, plastid	23.62	11.72
KRH22885	Soybean	cytosol, mitochondrion, nucleus, plastid	23.12	11.7
KRH29911	Soybean	cytosol, nucleus, plastid	23.62	11.44
KRH26403	Soybean	cytosol, mitochondrion, nucleus, plastid	23.62	11.44
KRH46125	Soybean	mitochondrion, nucleus	18.59	10.51
KRH57881	Soybean	nucleus	25.13	9.92
KRG96921	Soybean	nucleus	26.63	9.85
KRH68665	Soybean	nucleus	25.63	9.46
KRG98822	Soybean	nucleus	12.06	8.86
EES09107	Sorghum	cytosol	15.08	8.31
Zm00001d052326_P001	Maize	cytosol	13.07	7.2
TraesCS5B01G148000.1	Wheat	plastid	11.06	6.4
TraesCS5A01G149300.1	Wheat	cytosol, plastid	11.06	6.4

Protein Annotations

Gene3D:3.30.160.20	MapMan:35.1	UniProt:A0A0R0KHH5	EMBL:ACUP02002478	EnsemblPlantsGene:GLYMA_04G146300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003725	GO:GO:0003824	GO:GO:0004518	GO:GO:0004525
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0030422	GO:GO:0031053	GO:GO:0031054	GO:GO:0040029	GO:GO:0090502
InterPro:IPR014720	EnsemblPlants:KRH62980	ProteinID:KRH62980	ProteinID:KRH62980.1	PFAM:PF00035	PFscan:PS50137
PANTHER:PTHR11207	PANTHER:PTHR11207:SF8	SMART:SM00358	SUPFAM:SSF54768	UniParc:UPI0006EDE406	InterPro:dsRBD_dom
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:27544484..27548002

Molecular Weight (calculated)

22264.6 Da

IEP (calculated)

8.628

GRAVY (calculated)

-0.176

Length

199 amino acids

Sequence
(BLAST)

001: MYKTRLQDFT SKSGIQFPVY HTINEGHIPK FRSTVWVAEM RYTSPSTFSQ KKVVEQDVAR LALEGILHRT RDEGLSLVDQ ISPIFKSIMN EYAHKLHVEQ
101: PTYNNDKQLL GGVLPAFITS LVFNGTSYTG GPAGTKKDVE QSAAKAAILS IMSILSCDSS SGTALAEVIR SKSIFYYAVL SDIQDFNHVS NMWKCPWYA

Best Arabidopsis Sequence Match ( AT1G09700.2 )
(BLAST)

001: MTSTDVSSGV SNCYVFKSRL QEYAQKYKLP TPVYEIVKEG PSHKSLFQST VILDGVRYNS LPGFFNRKAA EQSAAEVALR ELAKSSELSQ CVSQPVHETG
101: LCKNLLQEYA QKMNYAIPLY QCQKVETLGR VTQFTCTVEI GGIKYTGAAT RTKKDAEISA GRTALLAIQS DTKNNLANYN TQLTVLPCEK KTIQAAIPLK
201: ETVKTLKARK AQFKKKAQKG KRTVAKNPED IIIPPQPTDH CQNDQSEKIE TTPNLEPSSC MNGLKEAAFG SVETEASHA

Arabidopsis Description

DRB1Double-stranded RNA-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04492]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.