Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96921 | Soybean | nucleus | 91.84 | 92.01 |
| KRH55141 | Soybean | cytosol, mitochondrion, nucleus, plastid | 20.04 | 69.68 |
| KRG90046 | Soybean | nucleus | 11.32 | 67.78 |
| KRH58007 | Soybean | nucleus | 11.13 | 66.67 |
| VIT_14s0030g01280.t01 | Wine grape | nucleus | 51.95 | 48.61 |
| KRH26403 | Soybean | cytosol, mitochondrion, nucleus, plastid | 33.02 | 43.31 |
| KRH22885 | Soybean | cytosol, mitochondrion, nucleus, plastid | 31.35 | 43.0 |
| KRH25014 | Soybean | cytosol, nucleus, plastid | 31.91 | 42.89 |
| KRH29911 | Soybean | cytosol, nucleus, plastid | 32.47 | 42.58 |
| GSMUA_Achr5P00420_001 | Banana | nucleus | 40.07 | 37.63 |
| Zm00001d024861_P007 | Maize | nucleus | 35.62 | 37.35 |
| KXG21311 | Sorghum | nucleus | 38.03 | 35.78 |
| Os05t0150400-01 | Rice | cytosol, nucleus | 39.52 | 35.32 |
| TraesCS1A01G091200.2 | Wheat | nucleus | 37.11 | 35.09 |
| TraesCS1D01G099700.1 | Wheat | nucleus | 36.73 | 34.68 |
| HORVU1Hr1G021530.1 | Barley | nucleus | 37.29 | 34.66 |
| TraesCS1B01G119000.1 | Wheat | nucleus | 36.92 | 34.43 |
| KRH63090 | Soybean | nucleus | 8.35 | 28.85 |
| KRH62980 | Soybean | nucleus | 9.46 | 25.63 |
| KRH46125 | Soybean | mitochondrion, nucleus | 13.36 | 20.45 |
| KRH62246 | Soybean | nucleus | 12.8 | 19.22 |
| KRG98822 | Soybean | nucleus | 9.65 | 19.19 |
| KRH52961 | Soybean | nucleus | 12.8 | 19.01 |
| KRH15123 | Soybean | nucleus | 14.84 | 17.43 |
| KRH01275 | Soybean | nucleus | 10.02 | 16.17 |
| KRH30959 | Soybean | mitochondrion | 8.16 | 15.94 |
| KRH57881 | Soybean | nucleus | 14.84 | 15.87 |
| KRH73012 | Soybean | nucleus | 8.16 | 15.07 |
Protein Annotations
| EntrezGene:100790730 | Gene3D:3.30.160.20 | MapMan:35.1 | EMBL:ACUP02002121 | EnsemblPlantsGene:GLYMA_03G243600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR014720 | UniProt:K7KGT5 | ProteinID:KRH68664.1 |
| EnsemblPlants:KRH68665 | ProteinID:KRH68665 | ProteinID:KRH68665.1 | PFAM:PF00035 | PFscan:PS50137 | PANTHER:PTHR10910 |
| PANTHER:PTHR10910:SF142 | SMART:SM00358 | SUPFAM:SSF54768 | UniParc:UPI00023377B9 | InterPro:dsRBD_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:44123826..44128309
Molecular Weight (calculated)
59184.9 Da
IEP (calculated)
8.733
GRAVY (calculated)
-0.497
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKNRLQELA QRSCFNLPAY SCIREGPDHA PRFKATVNFN GETFESPTFC STLRQAEHAA AEVALNTLAK RGPSRALAAR VLDETGVYKN LLQETAHRAG
101: LNLPVYTTIR SGPGHGPNFS CTVEIAGMHF TGDPSRTKKQ AQKNAAMAAW SALRKLSEHH LSSSTSSSFS LESKGNEEQE QVIIARVLAS LHPSGSKNFS
201: KSDIQLGWQK STTTSLVSTQ PTTDLYPMHC QHFGISSFSP EVALYQIWQQ QQIMQQQNRL LALTIQPIIP STSQIYPLMQ SVFQPDHCLY FPARELASVP
301: VGPKLSIPSS SPSFYSSNQI GPELNTGRST LTIKEIQEEK IEDPPVCSFS NETRVLTPAT EDESQRHGGS GSRSINAELG GEHCEKSECD SHWGTGSVHR
401: PVNPELQNPS SIDSSVLRAH SQASSNRSFR PPAASSSSIV RTMCPTSFVG SRPQHVAPRL RTGTPRSPGI PIYERFGMIR APTPLFMAPA VRIRSVVPVC
501: SAPPRRSMAE VSQSKEKEDL KPEDKEVPRT SSELGHLRI
101: LNLPVYTTIR SGPGHGPNFS CTVEIAGMHF TGDPSRTKKQ AQKNAAMAAW SALRKLSEHH LSSSTSSSFS LESKGNEEQE QVIIARVLAS LHPSGSKNFS
201: KSDIQLGWQK STTTSLVSTQ PTTDLYPMHC QHFGISSFSP EVALYQIWQQ QQIMQQQNRL LALTIQPIIP STSQIYPLMQ SVFQPDHCLY FPARELASVP
301: VGPKLSIPSS SPSFYSSNQI GPELNTGRST LTIKEIQEEK IEDPPVCSFS NETRVLTPAT EDESQRHGGS GSRSINAELG GEHCEKSECD SHWGTGSVHR
401: PVNPELQNPS SIDSSVLRAH SQASSNRSFR PPAASSSSIV RTMCPTSFVG SRPQHVAPRL RTGTPRSPGI PIYERFGMIR APTPLFMAPA VRIRSVVPVC
501: SAPPRRSMAE VSQSKEKEDL KPEDKEVPRT SSELGHLRI
001: MYKNQLQELA QRSCFNLPSY TCIREGPDHA PRFKASVNFN GEIFESPTYC STLRQAEHAA AEVSLNVLSS RVPSKSLTAK ILDETGIYKN LLQETAHRAG
101: LDLPMYTSVR SGSCHFPGFS CTVELAGMTF TGESAKTKKQ AEKNAAIAAW SSLKKMSSLD SQDEEKEQEA VARVLSRFKP KEVRRRETTN QWRRRTSQQD
201: SNKDLLIERL RWINLLTNQA SSSSSTSTPN QHKNSSFISL IPPPPPPKSS KILPFIQQYK DRSSQEAKTE TATEMINSKA KVNETSTRLS KQMPFSDMNR
301: YNFVGGCSVN PYSLAPAVQM RSVIPVFAAP PPKPNPNLNP SSLSSSVNEF TSSNNSCSVL NTPGLGGQEK KNLTREMIKL GSESRILDQT HDS
101: LDLPMYTSVR SGSCHFPGFS CTVELAGMTF TGESAKTKKQ AEKNAAIAAW SSLKKMSSLD SQDEEKEQEA VARVLSRFKP KEVRRRETTN QWRRRTSQQD
201: SNKDLLIERL RWINLLTNQA SSSSSTSTPN QHKNSSFISL IPPPPPPKSS KILPFIQQYK DRSSQEAKTE TATEMINSKA KVNETSTRLS KQMPFSDMNR
301: YNFVGGCSVN PYSLAPAVQM RSVIPVFAAP PPKPNPNLNP SSLSSSVNEF TSSNNSCSVL NTPGLGGQEK KNLTREMIKL GSESRILDQT HDS
Arabidopsis Description
DRB5Double-stranded RNA-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY79]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.