CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH57335

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24680.1	KRH57335	AT1G12520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53668	Soybean	cytosol	81.29	64.62
KRH72573	Soybean	cytosol	50.97	36.66
HORVU0Hr1G014940.1	Barley	cytosol	43.87	35.14
KRH16939	Soybean	cytosol	34.52	34.08
TraesCS6D01G027400.1	Wheat	cytosol	44.84	33.74
AT5G24680.1	Thale cress	extracellular	42.9	33.33
HORVU6Hr1G004180.9	Barley	nucleus	44.19	33.17
TraesCS6B01G032700.1	Wheat	cytosol	43.87	33.01
GSMUA_Achr6P36850_001	Banana	cytosol	43.23	32.92
VIT_16s0098g00580.t01	Wine grape	cytosol	46.13	32.87
CDX88128	Canola	cytosol	41.94	32.58
Zm00001d014950_P002	Maize	cytosol	43.23	32.45
OQU84154	Sorghum	nucleus	43.23	32.45
Zm00001d054072_P002	Maize	cytosol	44.84	32.4
Bra009788.1-P	Field mustard	cytosol, endoplasmic reticulum	41.29	32.24
CDX80465	Canola	cytosol	41.61	32.01
TraesCS6A01G024000.1	Wheat	cytosol	44.19	31.86
Solyc06g072970.2.1	Tomato	cytosol	41.29	30.26
PGSC0003DMT400069227	Potato	cytosol	40.97	30.17
Os02t0106700-01	Rice	cytosol, plastid	44.84	28.6

Protein Annotations

EMBL:ACUP02002750	EnsemblPlants:KRH64260	EnsemblPlantsGene:GLYMA_04G225400	EntrezGene:100795129	Gene3D:3.90.70.130	InterPro:Peptidase_C78_UfSP1/2
PANTHER:PTHR44681	PFAM:PF07910	ProteinID:KRH64260	ProteinID:KRH64260.1	SEG:seg	UniParc:UPI0002966C67
UniProt:K7KLR4	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:49551777..49554455

Molecular Weight (calculated)

34716.7 Da

IEP (calculated)

5.188

GRAVY (calculated)

-0.344

Length

310 amino acids

Sequence
(BLAST)

001: MDSDSFVSCP FCDSQVPFSQ RTGHFKTHFW DLDDDFDLPP TPQSQSLPRE QAPNGSRSGA NYSCGGETNS DNGECKVNDK ISCLIGSQTR SNFYKVEGGL
101: MALLRNCLDS EVGNSYSILS GYVDHFQCLE SEDAGWGCGW CNIQMLCSHL LVERPEARKA LFGGSGFVPD ILSLQRWLEI AWEKGFDAPG SAQFNYVICG
201: SKEWIGTTEC TALLRSFALR ARVVDFGPKE SQSLTGSSVD NMRDKANIHN IVKRKAEKSE GYQVLMDFVW NYFSDKSSIL FCQQHVVISE KTPVMAYFRY
301: KFLTSNNFVS

Best Arabidopsis Sequence Match ( AT5G65030.1 )
(BLAST)

001: MGVMEKKLRS LKCQVRIVEA RNVEIKSQAS TLFVRFYLSA GHNRKIEVNT RELSSKSDQL MWDQSFGLEC QGDEAAVKEL KQQRVVFELR RKKISTFLRK
101: SSKSEVVGRG EVSWESVFES PGMEIERLVV MGESKNWVLE DERPLLLKIA LKVQALEEME KMLIKNDKKT EKLCCVCSSR DCGSCSCLDY EAFALVCALD
201: CI

Arabidopsis Description

At5g65030 [Source:UniProtKB/TrEMBL;Acc:Q9LV76]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.