Factsheet for Os02t0106700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0573200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24680.1	Os04t0573200-01	AT1G12520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014950_P002	Maize	cytosol	62.76	73.85
OQU84154	Sorghum	nucleus	62.14	73.12
Zm00001d054072_P002	Maize	cytosol	63.58	72.03
TraesCS6D01G027400.1	Wheat	cytosol	58.85	69.42
HORVU6Hr1G004180.9	Barley	nucleus	58.44	68.77
TraesCS6B01G032700.1	Wheat	cytosol	58.23	68.69
TraesCS6A01G024000.1	Wheat	cytosol	58.23	65.81
HORVU0Hr1G014940.1	Barley	cytosol	47.74	59.95
GSMUA_Achr6P36850_001	Banana	cytosol	46.5	55.53
KRH53668	Soybean	cytosol	41.56	51.79
KRH16939	Soybean	cytosol	32.92	50.96
VIT_16s0098g00580.t01	Wine grape	cytosol	44.65	49.89
PGSC0003DMT400069227	Potato	cytosol	43.21	49.88
Solyc06g072970.2.1	Tomato	cytosol	42.8	49.17
KRH72573	Soybean	cytosol	43.0	48.49
AT5G24680.1	Thale cress	extracellular	37.86	46.12
CDX88128	Canola	cytosol	37.65	45.86
Bra009788.1-P	Field mustard	cytosol, endoplasmic reticulum	37.45	45.84
KRH64260	Soybean	cytosol	28.6	44.84
CDX80465	Canola	cytosol	36.83	44.42

Protein Annotations

EnsemblPlants:Os02t0106700-01	EnsemblPlantsGene:Os02g0106700	Gene3D:3.90.70.130	InterPro:Peptidase_C78_UfSP1/2	PANTHER:PTHR44681	PFAM:PF07910
ProteinID:BAS76570.1	SEG:seg	UniParc:UPI000393AE0D	UniProt:A0A0P0VDR8	MapMan:35.2	:

Description

Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 domain containing protein. (Os02t0106700-01)

Coordinates

chr2:+:391819..395616

Molecular Weight (calculated)

53738.3 Da

IEP (calculated)

7.440

GRAVY (calculated)

-0.470

Length

486 amino acids

Sequence
(BLAST)

001: IRIGGEGGTH SNSIVYYCLL LSPPLPRAYV SDYQPGRPPL VADRAGAARS AAVRPACSNS AARPLRGEGE EMISSCPICN VQVLTAELQW HANAHFDDDQ
101: LQTDMELAHQ IALTQSTPNP LLLDTHQECN NLFAGDPHAQ GASSSIAGSS SLQGSVLDEQ VSCLLQAQLR SNVQEIQGGV MNLLRACLES EAGSSTSMIS
201: GHVDHYQSLS SEDKGWGCGW RNIQMLSSHL LKQRPEAREA LFGGSGFVPD IPSLQRWLEI AWDKKFDTLG SSHFHNKVYG AKKWIGTTEC AALLRSFGLR
301: ARVVDFDSTE SSGPHSKNGK HAPKRVQGPM DKFLIKNVSP TSTSSELCRE DAENMRGQQV LVDWIWNYFA SRHSDNSDSS RRVLVSDKTP LYFQHQGHSR
401: TIVGIQKQNG QHGNQDRFTL LILDPGHRTS DLERALRSKT GWQRLVKRGV HTLRKPQYQL CYVDPGIASS EEMEQLKTID SILVRF

Best Arabidopsis Sequence Match ( AT5G24680.1 )
(BLAST)

001: MSALCPVCNL TLPLSLIQSH VNSHFEDDEI NPQIETDHHL ALQLASDDHS SDDPSSSSSA SSSNNVASLV QLQTKSQFYS VGHGGLICLL RNCLESELKL
101: KSKPLECSTS LLSGFVDHFQ SSKEDKGWGC GWKNIQMQCS HLLSHREEAK RVLFGGSNFV PDIPSLQRWL ELAWNKGFDV SGALHFDNRI CGSKRWIGTT
201: ECAALLRSFG LKARIVDFAP EKSKSMYLSV PGSAIAPKVK SYGPMDRYMV KKGGSGKGKA VDSHSSNSSR ISKGAVLMEW VWNYFSDNRL SVSSGVHITN
301: KGPLYFQHEG HSRTIVGVQR RLQGTTFTPQ YNLLILDPAD FTRAIEIALI EKRGWEGYLK RGAHTLKCPE YQMLYVDNGI ADGEELEKLK TIDSHFVEF

Arabidopsis Description

Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 [Source:UniProtKB/TrEMBL;Acc:Q9FIR7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.