Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 4
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15420.1 | OQU85630 | AT1G63970.1 | 21798944 |
| AT3G15420.1 | OQU83842 | AT3G13940.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027399_P001 | Maize | nucleus | 38.5 | 62.59 |
| EER95620 | Sorghum | nucleus | 37.17 | 60.43 |
| TraesCS2D01G369300.1 | Wheat | cytosol | 31.86 | 51.06 |
| Os04t0530000-01 | Rice | cytosol | 31.86 | 50.0 |
| TraesCS2B01G390200.1 | Wheat | cytosol | 31.86 | 50.0 |
| TraesCS2A01G373100.1 | Wheat | cytosol | 31.42 | 48.97 |
| TraesCS3D01G466600.1 | Wheat | cytoskeleton, cytosol, nucleus | 26.99 | 45.19 |
| TraesCS3A01G470900.1 | Wheat | peroxisome | 12.39 | 36.84 |
| TraesCS3B01G513600.1 | Wheat | extracellular, golgi, plasma membrane | 32.3 | 35.61 |
| GSMUA_Achr11P... | Banana | cytosol | 21.68 | 35.25 |
| KRH22122 | Soybean | cytosol | 16.37 | 27.41 |
| VIT_19s0014g03060.t01 | Wine grape | cytosol | 17.26 | 26.71 |
| PGSC0003DMT400003969 | Potato | cytosol | 15.93 | 26.28 |
| Solyc07g063290.2.1 | Tomato | cytosol, nucleus | 15.49 | 26.12 |
| PGSC0003DMT400032421 | Potato | cytosol | 15.49 | 25.36 |
| Bra023568.1-P | Field mustard | cytosol | 10.62 | 24.74 |
| CDY38110 | Canola | cytosol | 11.95 | 23.08 |
| CDY64675 | Canola | cytosol | 11.5 | 22.61 |
| CDX85505 | Canola | cytosol | 11.5 | 22.61 |
| AT3G15420.1 | Thale cress | cytosol | 10.62 | 22.43 |
| AT1G80745.1 | Thale cress | cytosol | 9.73 | 21.57 |
| CDY55578 | Canola | cytosol | 10.62 | 20.87 |
Protein Annotations
| EnsemblPlants:KXG26700 | EnsemblPlantsGene:SORBI_3006G156801 | InterPro:TFIIIC_tau55-rel | PANTHER:PTHR21860 | PFAM:PF10419 | ProteinID:KXG26700 |
| ProteinID:KXG26700.2 | UniParc:UPI000B8BAE6D | UniProt:A0A1B6PM05 | MapMan:15.4.4.5 | : | : |
Description
hypothetical protein
Coordinates
chr6:-:51582555..51585008
Molecular Weight (calculated)
24501.2 Da
IEP (calculated)
10.407
GRAVY (calculated)
-0.512
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYRSQTPHR ALASLGPRAP SRSWPKPTRA QARSLLPSFS CSPRRLAAQP RPSVGWSLPP VATATRGDPP AAADHHPHTL LVYRRPSAGP SRRSLPQPAA
101: RRDPLAVAII TLSGSTAVPY VAVLPLAGLD TLTPTLIVGN GLKMIGEYEE TVGTCYLFSE SEAQPKPASN ETRPSEENTD KPTSCSKEAL SKEVNHLASV
201: QKILKFRPVN AERPQHLAYQ HKDKEI
101: RRDPLAVAII TLSGSTAVPY VAVLPLAGLD TLTPTLIVGN GLKMIGEYEE TVGTCYLFSE SEAQPKPASN ETRPSEENTD KPTSCSKEAL SKEVNHLASV
201: QKILKFRPVN AERPQHLAYQ HKDKEI
001: MEEEFVMIDL DEVSRHIEIP SDAPYTLSGL DTLNPVLTID GKIKLVGEYI ETIGTCLAFS EKEEVSASEN QMPHKKIIEP VAKLHKILKF RLAALDNDDG
101: ETKTNNL
101: ETKTNNL
Arabidopsis Description
At3g15420 [Source:UniProtKB/TrEMBL;Acc:Q9LDR3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.