Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0351500-01 | Rice | extracellular | 92.76 | 92.76 |
| GSMUA_Achr2P02380_001 | Banana | cytosol | 86.84 | 86.84 |
| VIT_14s0030g00950.t01 | Wine grape | cytosol | 82.24 | 86.21 |
| KRG96907 | Soybean | extracellular, plasma membrane | 86.18 | 86.18 |
| Solyc01g067740.2.1 | Tomato | extracellular | 85.53 | 85.53 |
| GSMUA_Achr7P03680_001 | Banana | plasma membrane | 85.53 | 85.53 |
| PGSC0003DMT400027651 | Potato | cytosol | 84.87 | 84.87 |
| KRH68647 | Soybean | extracellular | 84.87 | 84.87 |
| Bra031642.1-P | Field mustard | cytosol | 83.55 | 83.55 |
| CDY06331 | Canola | cytosol | 83.55 | 83.55 |
| CDX93533 | Canola | cytosol | 83.55 | 83.55 |
| AT1G08830.1 | Thale cress | cytosol | 83.55 | 83.55 |
| CDX95028 | Canola | cytosol | 82.89 | 82.89 |
| VIT_14s0030g00830.t01 | Wine grape | cytosol | 80.92 | 81.46 |
| KXG36882 | Sorghum | cytosol | 88.82 | 81.33 |
| Zm00001d047479_P002 | Maize | cytosol | 84.21 | 68.45 |
| CDY22663 | Canola | plastid | 80.26 | 64.21 |
| VIT_14s0036g01320.t01 | Wine grape | cytosol | 32.89 | 63.29 |
| Zm00001d029170_P004 | Maize | cytosol | 85.53 | 56.03 |
| EER95258 | Sorghum | cytosol | 59.87 | 55.83 |
| EES15166 | Sorghum | plastid | 63.82 | 47.09 |
Protein Annotations
| MapMan:10.2.2.3 | Gene3D:2.60.40.200 | UniProt:A0A1B6QN96 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004784 |
| GO:GO:0005488 | GO:GO:0006801 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0019430 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036423 | ProteinID:KXG39375.1 |
| EnsemblPlants:OQU92597 | ProteinID:OQU92597 | ProteinID:OQU92597.1 | PFAM:PF00080 | PRINTS:PR00068 | ScanProsite:PS00087 |
| ScanProsite:PS00332 | PANTHER:PTHR10003 | PANTHER:PTHR10003:SF34 | InterPro:SOD-like_Cu/Zn_dom_sf | InterPro:SOD_Cu/Zn_/chaperone | InterPro:SOD_Cu/Zn_BS |
| InterPro:SOD_Cu_Zn_dom | EnsemblPlantsGene:SORBI_3001G371900 | SUPFAM:SSF49329 | UniParc:UPI0001C80A43 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:66007310..66010619
Molecular Weight (calculated)
15088.6 Da
IEP (calculated)
6.057
GRAVY (calculated)
-0.180
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKAVAVLGS SEGVKGTIFF TQEGDGPTTV TGSVSGLKPG LHGFHVHALG DTTNGCMSTG PHYNPASKEH GAPEDENRHA GDLGNVTAGA DGVANISVTD
101: SQIPLTGPNS IIGRAVVVHA DPDDLGKGGH ELSKSTGNAG GRVACGIIGL QG
101: SQIPLTGPNS IIGRAVVVHA DPDDLGKGGH ELSKSTGNAG GRVACGIIGL QG
001: MAKGVAVLNS SEGVTGTIFF TQEGDGVTTV SGTVSGLKPG LHGFHVHALG DTTNGCMSTG PHFNPDGKTH GAPEDANRHA GDLGNITVGD DGTATFTITD
101: CQIPLTGPNS IVGRAVVVHA DPDDLGKGGH ELSLATGNAG GRVACGIIGL QG
101: CQIPLTGPNS IVGRAVVVHA DPDDLGKGGH ELSLATGNAG GRVACGIIGL QG
Arabidopsis Description
CSD1Superoxide dismutase [Cu-Zn] 1 [Source:UniProtKB/Swiss-Prot;Acc:P24704]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.