Factsheet for Zm00001d047479_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92597	Sorghum	cytosol	68.45	84.21
Os03t0351500-01	Rice	extracellular	63.64	78.29
VIT_14s0030g00950.t01	Wine grape	cytosol	55.62	71.72
Solyc01g067740.2.1	Tomato	extracellular	58.29	71.71
GSMUA_Achr2P02380_001	Banana	cytosol	58.29	71.71
GSMUA_Achr7P03680_001	Banana	plasma membrane	58.29	71.71
KRG96907	Soybean	extracellular, plasma membrane	58.29	71.71
KRH68647	Soybean	extracellular	57.75	71.05
PGSC0003DMT400027651	Potato	cytosol	57.75	71.05
AT1G08830.1	Thale cress	cytosol	57.22	70.39
CDX93533	Canola	cytosol	57.22	70.39
CDX95028	Canola	cytosol	57.22	70.39
Bra031642.1-P	Field mustard	cytosol	56.68	69.74
CDY06331	Canola	cytosol	56.68	69.74
VIT_14s0030g00830.t01	Wine grape	cytosol	55.08	68.21
VIT_14s0036g01320.t01	Wine grape	cytosol	26.74	63.29
Zm00001d029170_P004	Maize	cytosol	75.4	60.78
CDY22663	Canola	plastid	55.62	54.74
Zm00001d022505_P002	Maize	cytosol	60.43	43.8
Zm00001d031908_P001	Maize	plastid	43.85	39.81
Zm00001d028232_P012	Maize	cytosol	35.83	35.64

Protein Annotations

MapMan:10.2.2.3	EntrezGene:103639134	Gene3D:2.60.40.200	EntrezGene:542722	UniProt:A0A1D6PAA9	ProteinID:AQL06656.1
ProteinID:AQL06661.1	ProteinID:AQL06666.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004784	GO:GO:0005488
GO:GO:0006801	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019430
GO:GO:0046872	GO:GO:0055114	InterPro:IPR036423	PFAM:PF00080	PRINTS:PR00068	ScanProsite:PS00087
PANTHER:PTHR10003	PANTHER:PTHR10003:SF34	InterPro:SOD-like_Cu/Zn_dom_sf	InterPro:SOD_Cu/Zn_/chaperone	InterPro:SOD_Cu/Zn_BS	InterPro:SOD_Cu_Zn_dom
SUPFAM:SSF49329	UniParc:UPI00084244B3	EnsemblPlantsGene:Zm00001d047479	EnsemblPlants:Zm00001d047479_P002	EnsemblPlants:Zm00001d047479_T002	:

Description

superoxide dismutase9Superoxide dismutase

Coordinates

chr9:-:131494599..131498025

Molecular Weight (calculated)

19723.1 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.302

Length

187 amino acids

Sequence
(BLAST)

001: MVKAVAVLGS SDGVKGTIFF TQEGDGPTAV TGSVSGLKPG LHGFHVHALG DTTNGCMSTG PHYNPASKEH GAPEDENRHA GDLGNVTAGA DGVANINVTD
101: SQIPLTGPNS IIGRAVVVHA DPDDLGKGPI QSRSSKWSIS DINSCWFSVC TFRWARAQQE HWKRRWPCCL WDHWTPGLKT IAGLGGA

Best Arabidopsis Sequence Match ( AT1G08830.1 )
(BLAST)

001: MAKGVAVLNS SEGVTGTIFF TQEGDGVTTV SGTVSGLKPG LHGFHVHALG DTTNGCMSTG PHFNPDGKTH GAPEDANRHA GDLGNITVGD DGTATFTITD
101: CQIPLTGPNS IVGRAVVVHA DPDDLGKGGH ELSLATGNAG GRVACGIIGL QG

Arabidopsis Description

CSD1Superoxide dismutase [Cu-Zn] 1 [Source:UniProtKB/Swiss-Prot;Acc:P24704]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.