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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
 plastid: 20089766
extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 20089766 doi
G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES15166 Sorghum plastid 94.66 94.66
Os08t0561700-01 Rice extracellular 84.95 82.94
TraesCS7A01G292100.1 Wheat plastid 77.67 79.6
TraesCS7D01G290700.2 Wheat plastid 77.67 79.21
TraesCS7B01G197300.1 Wheat golgi 76.7 78.61
KRH26536 Soybean plastid 62.62 70.49
Bra034394.1-P Field mustard plastid 66.99 66.67
CDY30502 Canola plastid 66.99 66.35
AT2G28190.1 Thale cress plastid 69.42 66.2
GSMUA_Achr10P... Banana plastid 68.93 65.74
VIT_06s0061g00750.t01 Wine grape extracellular, plastid 67.48 65.57
CDX77163 Canola plastid 64.56 65.52
PGSC0003DMT400001102 Potato plastid 67.48 64.65
Solyc11g066390.1.1 Tomato extracellular, plastid 67.48 64.06
HORVU7Hr1G060130.2 Barley plastid, vacuole 79.13 63.67
GSMUA_Achr9P20410_001 Banana plastid 68.93 62.01
Bra011971.1-P Field mustard plastid 49.51 50.25
Zm00001d047479_P002 Maize cytosol 39.81 43.85
Zm00001d028232_P012 Maize cytosol 35.44 38.83
Zm00001d022505_P002 Maize cytosol 46.6 37.21
Zm00001d029170_P004 Maize cytosol 40.78 36.21
Protein Annotations
MapMan:10.2.2.3EntrezGene:100136885Gene3D:2.60.40.200UniProt:B1PEY4EMBL:BT041068EMBL:BT063065
EMBL:EU408345EMBL:EU959272EMBL:EU959305EMBL:EU963633GO:GO:0003674GO:GO:0003824
GO:GO:0004784GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006412GO:GO:0006801GO:GO:0006950GO:GO:0006979GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009579
GO:GO:0009628GO:GO:0009987GO:GO:0010039GO:GO:0016491GO:GO:0019430GO:GO:0019538
GO:GO:0034599GO:GO:0035195GO:GO:0040029GO:GO:0046688GO:GO:0046872GO:GO:0048046
GO:GO:0055114GO:GO:0071329GO:GO:0071457GO:GO:0071472GO:GO:0071484GO:GO:0071493
InterPro:IPR036423ProteinID:ONM03929.1PFAM:PF00080PRINTS:PR00068ScanProsite:PS00087ScanProsite:PS00332
PANTHER:PTHR10003PANTHER:PTHR10003:SF34InterPro:SOD-like_Cu/Zn_dom_sfInterPro:SOD_Cu/Zn_/chaperoneInterPro:SOD_Cu/Zn_BSInterPro:SOD_Cu_Zn_dom
SUPFAM:SSF49329UniParc:UPI000165BAD7EnsemblPlantsGene:Zm00001d031908EnsemblPlants:Zm00001d031908_P001EnsemblPlants:Zm00001d031908_T001SEG:seg
Description
Superoxide dismutase
Coordinates
chr1:-:206405716..206408991
Molecular Weight (calculated)
20896.6 Da
IEP (calculated)
5.710
GRAVY (calculated)
0.128
Length
206 amino acids
Sequence
(BLAST)
001: MAAQSFLLAA TAAARSPAVF AAPYSSARPF HSVHFVAGPW GAAAARALVV ADATKKAVAV LKGASEVEGV VTLTQDDDGP TTVNVRITGL TPGLHGFHLH
101: EFGDTTNGCI STGPHFNPNN LTHGAPEDEV RHAGDLGNIV ANAEGIAEAT IVDTQIPLTG PNSVVGRAFV VHELEDDLGK GGHELSLSTG NAGGRLACGV
201: VGLTPL
Best Arabidopsis Sequence Match ( AT2G28190.1 )
(BLAST)
001: MAATNTILAF SSPSRLLIPP SSNPSTLRSS FRGVSLNNNN LHRLQSVSFA VKAPSKALTV VSAAKKAVAV LKGTSDVEGV VTLTQDDSGP TTVNVRITGL
101: TPGPHGFHLH EFGDTTNGCI STGPHFNPNN MTHGAPEDEC RHAGDLGNIN ANADGVAETT IVDNQIPLTG PNSVVGRAFV VHELKDDLGK GGHELSLTTG
201: NAGGRLACGV IGLTPL
Arabidopsis Description
CSD2Superoxide dismutase [Cu-Zn] 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O78310]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.