Factsheet for Zm00001d022505_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36882	Sorghum	cytosol	55.43	86.14
GSMUA_Achr2P02380_001	Banana	cytosol	50.0	84.87
GSMUA_Achr7P03680_001	Banana	plasma membrane	48.84	82.89
VIT_14s0030g00950.t01	Wine grape	cytosol	45.74	81.38
TraesCS2D01G123300.1	Wheat	extracellular, golgi, unclear	47.67	80.92
VIT_14s0030g00830.t01	Wine grape	cytosol	47.29	80.79
Solyc01g067740.2.1	Tomato	extracellular	46.9	79.61
PGSC0003DMT400027651	Potato	cytosol	46.51	78.95
KRG96907	Soybean	extracellular, plasma membrane	46.51	78.95
KRH68647	Soybean	extracellular	46.51	78.95
TraesCS2A01G121200.1	Wheat	golgi, unclear	47.29	77.71
CDX93533	Canola	cytosol	45.35	76.97
Bra031642.1-P	Field mustard	cytosol	44.96	76.32
CDY06331	Canola	cytosol	44.96	76.32
CDX95028	Canola	cytosol	44.96	76.32
AT1G08830.1	Thale cress	cytosol	44.96	76.32
HORVU5Hr1G066230.1	Barley	cytosol	41.86	75.0
HORVU5Hr1G066930.1	Barley	cytosol	41.09	73.61
VIT_14s0036g01320.t01	Wine grape	cytosol	19.38	63.29
CDY22663	Canola	plastid	45.35	61.58
Zm00001d047479_P002	Maize	cytosol	43.8	60.43
HORVU2Hr1G021110.3	Barley	plastid	33.33	53.75
Zm00001d029170_P004	Maize	cytosol	44.96	50.0
Zm00001d031908_P001	Maize	plastid	37.21	46.6
Zm00001d028232_P012	Maize	cytosol	29.07	39.89

Protein Annotations

MapMan:10.2.2.3	Gene3D:2.60.40.200	EntrezGene:542260	UniProt:A0A1D6INM7	GO:GO:0003674	GO:GO:0003824
GO:GO:0004784	GO:GO:0005488	GO:GO:0006801	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019430	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036423	ProteinID:ONM60870.1
PFAM:PF00080	PRINTS:PR00068	ScanProsite:PS00087	PANTHER:PTHR10003	PANTHER:PTHR10003:SF34	InterPro:SOD-like_Cu/Zn_dom_sf
InterPro:SOD_Cu/Zn_/chaperone	InterPro:SOD_Cu/Zn_BS	InterPro:SOD_Cu_Zn_dom	SUPFAM:SSF49329	UniParc:UPI0008455031	EnsemblPlantsGene:Zm00001d022505
EnsemblPlants:Zm00001d022505_P002	EnsemblPlants:Zm00001d022505_T002	:	:	:	:

Description

superoxide dismutase2Superoxide dismutase

Coordinates

chr7:+:179056206..179061245

Molecular Weight (calculated)

27777.8 Da

IEP (calculated)

6.441

GRAVY (calculated)

-0.231

Length

258 amino acids

Sequence
(BLAST)

001: MRSFVYAGYE IDQERRQIYA FFGPGNETVW DFVGKITETM VKAVAVLAGT DVKGTIFFSQ EGDGNSRHMF LTYNEDLCGL TRISASWVGP TTVTGSISGL
101: KPGLHGFHVH ALGDTTNGCM STGPHFNPVG KEHGAPEDED RHAGDLGNVT AGEDGVVNVN ITDSQIPLAG PHSIIGRAVV VHADPDDLGK GGHELSKSTG
201: NAGGRVACGK LYRGVFPVSW YHWAPRLKQL TSEANTIEGR SEHLRMLLFH FPCIGNTI

Best Arabidopsis Sequence Match ( AT1G08830.1 )
(BLAST)

001: MAKGVAVLNS SEGVTGTIFF TQEGDGVTTV SGTVSGLKPG LHGFHVHALG DTTNGCMSTG PHFNPDGKTH GAPEDANRHA GDLGNITVGD DGTATFTITD
101: CQIPLTGPNS IVGRAVVVHA DPDDLGKGGH ELSLATGNAG GRVACGIIGL QG

Arabidopsis Description

CSD1Superoxide dismutase [Cu-Zn] 1 [Source:UniProtKB/Swiss-Prot;Acc:P24704]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.