Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc02g087750.2.1 | Tomato | mitochondrion, nucleus | 76.0 | 100.0 |
PGSC0003DMT400083067 | Potato | mitochondrion, nucleus | 75.0 | 98.68 |
PGSC0003DMT400046771 | Potato | mitochondrion, nucleus | 75.0 | 98.68 |
AT2G02760.2 | Thale cress | mitochondrion, nucleus | 73.5 | 96.71 |
Bra024808.1-P | Field mustard | mitochondrion, nucleus | 73.5 | 96.71 |
Bra026222.1-P | Field mustard | mitochondrion, nucleus | 73.5 | 96.71 |
Bra026582.1-P | Field mustard | mitochondrion, nucleus | 73.5 | 96.71 |
Bra017410.1-P | Field mustard | mitochondrion, nucleus | 73.0 | 96.05 |
PGSC0003DMT400046571 | Potato | mitochondrion, nucleus | 73.0 | 96.05 |
TraesCS3B01G131500.2 | Wheat | nucleus | 72.5 | 95.39 |
Bra026833.1-P | Field mustard | mitochondrion, nucleus | 72.5 | 95.39 |
CDY39315 | Canola | mitochondrion | 72.5 | 95.39 |
AT1G14400.1 | Thale cress | mitochondrion, nucleus | 72.5 | 95.39 |
PGSC0003DMT400017857 | Potato | mitochondrion, nucleus | 70.5 | 92.76 |
TraesCS3D01G114600.3 | Wheat | mitochondrion | 72.5 | 89.51 |
TraesCS3A01G112600.1 | Wheat | mitochondrion | 72.5 | 89.51 |
Bra016704.1-P | Field mustard | nucleus | 65.0 | 85.53 |
KRG99148 | Soybean | mitochondrion | 54.5 | 83.21 |
CDX84034 | Canola | nucleus | 44.0 | 82.24 |
Bra016703.1-P | Field mustard | nucleus | 77.0 | 73.33 |
CDX96859 | Canola | mitochondrion | 66.0 | 69.84 |
HORVU3Hr1G020470.1 | Barley | plastid | 74.0 | 65.2 |
PGSC0003DMT400084207 | Potato | cytosol | 33.0 | 44.59 |
PGSC0003DMT400057302 | Potato | cytosol | 33.0 | 44.59 |
PGSC0003DMT400009229 | Potato | nucleus | 32.5 | 43.92 |
PGSC0003DMT400049914 | Potato | cytosol | 32.5 | 43.92 |
PGSC0003DMT400032059 | Potato | cytosol | 32.5 | 43.92 |
PGSC0003DMT400023419 | Potato | cytosol | 32.5 | 43.92 |
PGSC0003DMT400014816 | Potato | cytosol | 32.5 | 43.92 |
PGSC0003DMT400078296 | Potato | cytosol | 32.0 | 43.24 |
PGSC0003DMT400000272 | Potato | cytosol | 32.0 | 43.24 |
PGSC0003DMT400058107 | Potato | cytosol, mitochondrion | 29.5 | 39.86 |
PGSC0003DMT400012799 | Potato | mitochondrion | 32.0 | 38.1 |
PGSC0003DMT400032251 | Potato | cytosol | 28.5 | 37.25 |
PGSC0003DMT400054795 | Potato | cytosol | 28.0 | 36.6 |
PGSC0003DMT400053006 | Potato | golgi, nucleus, vacuole | 32.0 | 36.57 |
Protein Annotations
MapMan:19.2.2.1.4 | Gene3D:3.10.110.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0005524 | GO:GO:0016740 | InterPro:IPR000608 | InterPro:IPR016135 | UniProt:M0ZLF5 | PFAM:PF00179 |
EnsemblPlantsGene:PGSC0003DMG400001314 | PGSC:PGSC0003DMG400001314 | EnsemblPlants:PGSC0003DMT400003320 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR43898 |
PANTHER:PTHR43898:SF8 | SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD |
UniParc:UPI0002955921 | : | : | : | : | : |
Description
Ubiquitin carrier protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001314]
Coordinates
chr2:-:46391799..46396166
Molecular Weight (calculated)
22816.1 Da
IEP (calculated)
6.264
GRAVY (calculated)
-0.449
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGIPDVSEQ LTYHAKVYIY HKQANKNLNS EPITFIEILA AFNTQAVRMS TPARKRLMRD FKRLQQDPPA GISGAPYDNN IMLWNAVIFG PDDTPWDGGT
101: FKLTLQFSED YPNKPPTVRF VSRMFHPNIY ADGSICLDIL QNQWSPIYDV AAILTSIQSL LCDPNPNSPA NSEAARMFSE NKREYNRKVR EIVEQSWTAD
101: FKLTLQFSED YPNKPPTVRF VSRMFHPNIY ADGSICLDIL QNQWSPIYDV AAILTSIQSL LCDPNPNSPA NSEAARMFSE NKREYNRKVR EIVEQSWTAD
001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMF SESKREYNRR VREVVEQSWT AD
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMF SESKREYNRR VREVVEQSWT AD
Arabidopsis Description
UBC2UBC2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0U6]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.