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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g107950.1.1 Tomato nucleus 85.57 85.57
PGSC0003DMT400066259 Potato nucleus 85.9 85.34
PGSC0003DMT400066264 Potato nucleus 85.57 85.02
PGSC0003DMT400038759 Potato cytosol 60.98 79.49
PGSC0003DMT400066261 Potato nucleus 78.36 78.62
PGSC0003DMT400095438 Potato mitochondrion 70.82 73.22
VIT_03s0063g00170.t01 Wine grape nucleus 41.64 41.64
KRH70660 Soybean nucleus 33.11 36.46
GSMUA_Achr9P08780_001 Banana nucleus 34.75 35.1
CDY54067 Canola nucleus 31.8 32.33
Bra018796.1-P Field mustard nucleus 31.48 32.0
CDY51046 Canola nucleus 31.48 32.0
CDY69996 Canola nucleus 32.13 31.31
Bra040671.1-P Field mustard nucleus 31.8 30.99
AT1G49770.1 Thale cress nucleus 31.15 30.84
CDY29335 Canola nucleus 30.49 29.71
TraesCS6B01G142000.1 Wheat nucleus 28.52 29.0
HORVU6Hr1G020520.2 Barley cytosol 27.87 28.62
TraesCS6A01G114100.1 Wheat nucleus, plastid 27.54 28.0
Zm00001d035154_P001 Maize nucleus 22.62 25.46
Os04t0429300-01 Rice cytosol, nucleus, plastid 20.0 25.31
Os04t0429400-01 Rice nucleus 26.23 24.02
EES14471 Sorghum nucleus, plastid 20.33 22.55
KXG24316 Sorghum nucleus 23.28 22.26
OQU85093 Sorghum nucleus 23.28 22.05
EES05218 Sorghum nucleus 23.93 21.92
KRH70659 Soybean cytosol, vacuole 19.34 21.61
Zm00001d003677_P003 Maize nucleus 29.84 14.58
KXG26314 Sorghum nucleus, plastid 30.16 14.24
Protein Annotations
EntrezGene:107060365MapMan:15.5.32Gene3D:4.10.280.10InterPro:ACT_domGO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR002912InterPro:IPR011598InterPro:IPR036638
UniProt:M1CF93PFAM:PF00010EnsemblPlantsGene:PGSC0003DMG400025780PGSC:PGSC0003DMG400025780EnsemblPlants:PGSC0003DMT400066257PFscan:PS50888
PFscan:PS51671PANTHER:PTHR11514PANTHER:PTHR11514:SF96SMART:SM00353SUPFAM:SSF47459SUPFAM:SSF55021
UniParc:UPI00029630CERefSeq:XP_015163699.1InterPro:bHLH_dom:::
Description
Transcription factor bHLH95 [Source:PGSC_GENE;Acc:PGSC0003DMG400025780]
Coordinates
chr1:+:84316292..84318797
Molecular Weight (calculated)
34152.6 Da
IEP (calculated)
7.561
GRAVY (calculated)
-0.603
Length
305 amino acids
Sequence
(BLAST)
001: MNGGGENNHG LPWETNDFWS YLNLNDNQIG SEETFEGDKL PDPTRSDTCQ PLTVVNEVVT TDVGKKRSPP NRKRNGKGIA EPNSGVDGAE GKRESEHEIH
101: IWTERERRKK MRTLFETLHE LVPNLPAKAD KSTIVYEAVN HILKLQNTFK KLESQKLKRL EEYSIRLMGS QKIGNSWEKY VGDQGSTCNS TTITPTNHGA
201: SPLIPTSFMT WSSPNVILNV CGEDAHISVC CPKKPGLFTM ICYVLEKHKI DIVSAQISSD QFRSMFMIQA HAKGESGITQ FSVAFKVEER LKQAATEIMS
301: LATPK
Best Arabidopsis Sequence Match ( AT1G49770.1 )
(BLAST)
001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
Arabidopsis Description
BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.