Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040671.1-P | Field mustard | nucleus | 97.44 | 97.44 |
| CDY29335 | Canola | nucleus | 88.18 | 88.18 |
| CDY54067 | Canola | nucleus | 70.61 | 73.67 |
| CDY51046 | Canola | nucleus | 69.01 | 72.0 |
| AT1G49770.1 | Thale cress | nucleus | 64.22 | 65.26 |
| VIT_03s0063g00170.t01 | Wine grape | nucleus | 37.7 | 38.69 |
| KRH70660 | Soybean | nucleus | 30.99 | 35.02 |
| GSMUA_Achr9P08780_001 | Banana | nucleus | 33.23 | 34.44 |
| Solyc01g020180.1.1 | Tomato | cytosol | 13.1 | 33.88 |
| PGSC0003DMT400066261 | Potato | nucleus | 31.95 | 32.89 |
| Solyc01g107950.1.1 | Tomato | nucleus | 31.63 | 32.46 |
| PGSC0003DMT400066257 | Potato | nucleus | 31.31 | 32.13 |
| Solyc01g107960.2.1 | Tomato | nucleus | 30.35 | 31.77 |
| PGSC0003DMT400066264 | Potato | nucleus | 30.67 | 31.27 |
| PGSC0003DMT400066259 | Potato | nucleus | 30.35 | 30.94 |
| PGSC0003DMT400095438 | Potato | mitochondrion | 27.8 | 29.49 |
| PGSC0003DMT400038759 | Potato | cytosol | 22.04 | 29.49 |
| Solyc01g020170.1.1 | Tomato | nucleus | 28.43 | 29.28 |
| Solyc01g107970.1.1 | Tomato | nucleus | 28.11 | 28.95 |
| Solyc01g057300.1.1 | Tomato | nucleus | 27.8 | 28.34 |
| Zm00001d035154_P001 | Maize | nucleus | 23.96 | 27.68 |
| Solyc01g014910.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 27.8 | 27.62 |
| Solyc09g018150.1.1 | Tomato | nucleus | 26.52 | 25.94 |
| Solyc01g014960.1.1 | Tomato | cytosol | 20.45 | 25.7 |
| HORVU6Hr1G020520.2 | Barley | cytosol | 24.28 | 25.59 |
| Solyc12g036430.1.1 | Tomato | nucleus | 12.78 | 24.39 |
| TraesCS6B01G142000.1 | Wheat | nucleus | 23.32 | 24.33 |
| Os04t0429300-01 | Rice | cytosol, nucleus, plastid | 18.53 | 24.07 |
| Solyc09g018130.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 14.38 | 24.06 |
| TraesCS6A01G114100.1 | Wheat | nucleus, plastid | 22.68 | 23.67 |
| Os04t0429400-01 | Rice | nucleus | 24.92 | 23.42 |
| KXG24316 | Sorghum | nucleus | 23.0 | 22.57 |
| EES14471 | Sorghum | nucleus, plastid | 17.57 | 20.0 |
| KRH70659 | Soybean | cytosol, vacuole | 17.25 | 19.78 |
| EES05218 | Sorghum | nucleus | 19.49 | 18.32 |
| OQU85093 | Sorghum | nucleus | 15.97 | 15.53 |
| KXG26314 | Sorghum | nucleus, plastid | 30.67 | 14.86 |
| Zm00001d003677_P003 | Maize | nucleus | 28.11 | 14.1 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078JWX2 | UniProt:A0A078JWX2 | EnsemblPlants:CDY69996 | ProteinID:CDY69996 |
| ProteinID:CDY69996.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00094237001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF98 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EBE25F | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng66260DBnaCnng66260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWX2]
Coordinates
chrLK040888:+:1041..2925
Molecular Weight (calculated)
35019.2 Da
IEP (calculated)
6.624
GRAVY (calculated)
-0.567
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIQFNMTNA QELGQESIVW GISNSDDSQG GCKRIDKQPP LVRPSHPSEI PTSDKKASKG KKRTQRNEKN HVEESPDHEI HIWTERERRK KMRDMFAKLH
101: ALLPQLPPKA DKSTIVDEAV SSIKSLEQTL HNLQMRKLEK LQYSSASNTT TTTAFPYDPS SSPTILLTPI SNQPHILPVG AASEDSYSRE ALLANQISSS
201: SMNLPNPCDD PTAEFDTWST RNAVLNICGN EAFFSLCCPK DKSGVFTNMC YLFEKYNIDV MFASVSSNVF RSTYMIQAQV KPSYENQLLG DGFGAAEIFK
301: QAAQEMAFYF SSP
101: ALLPQLPPKA DKSTIVDEAV SSIKSLEQTL HNLQMRKLEK LQYSSASNTT TTTAFPYDPS SSPTILLTPI SNQPHILPVG AASEDSYSRE ALLANQISSS
201: SMNLPNPCDD PTAEFDTWST RNAVLNICGN EAFFSLCCPK DKSGVFTNMC YLFEKYNIDV MFASVSSNVF RSTYMIQAQV KPSYENQLLG DGFGAAEIFK
301: QAAQEMAFYF SSP
001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
Arabidopsis Description
BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.