CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035154_P001	Maize	nucleus	40.36	40.96
KXG24316	Sorghum	nucleus	44.73	38.56
Solyc01g020180.1.1	Tomato	cytosol	12.36	28.1
TraesCS6B01G142000.1	Wheat	nucleus	28.0	25.67
HORVU6Hr1G020520.2	Barley	cytosol	27.27	25.25
TraesCS6A01G114100.1	Wheat	nucleus, plastid	26.55	24.33
EES05218	Sorghum	nucleus	29.09	24.02
OQU85093	Sorghum	nucleus	27.64	23.6
PGSC0003DMT400038759	Potato	cytosol	18.18	21.37
KRH70660	Soybean	nucleus	20.73	20.58
Solyc01g107960.2.1	Tomato	nucleus	22.18	20.4
PGSC0003DMT400066261	Potato	nucleus	22.55	20.39
VIT_03s0063g00170.t01	Wine grape	nucleus	22.55	20.33
PGSC0003DMT400066257	Potato	nucleus	22.55	20.33
PGSC0003DMT400066264	Potato	nucleus	22.55	20.2
Solyc01g014960.1.1	Tomato	cytosol	18.18	20.08
Solyc01g107950.1.1	Tomato	nucleus	22.18	20.0
Solyc01g020170.1.1	Tomato	nucleus	21.82	19.74
VIT_18s0001g10300.t01	Wine grape	nucleus	20.73	19.59
PGSC0003DMT400066259	Potato	nucleus	21.82	19.54
CDY54067	Canola	nucleus	20.73	19.0
Bra018796.1-P	Field mustard	nucleus	20.73	19.0
CDY51046	Canola	nucleus	20.73	19.0
GSMUA_Achr9P08780_001	Banana	nucleus	20.73	18.87
Solyc01g107970.1.1	Tomato	nucleus	20.73	18.75
AT1G49770.1	Thale cress	nucleus	20.73	18.51
Solyc01g057300.1.1	Tomato	nucleus	20.36	18.24
Bra040671.1-P	Field mustard	nucleus	20.36	17.89
Solyc09g018150.1.1	Tomato	nucleus	20.73	17.81
PGSC0003DMT400095438	Potato	mitochondrion	18.91	17.63
CDY69996	Canola	nucleus	20.0	17.57
CDY29335	Canola	nucleus	19.64	17.25
KRH70659	Soybean	cytosol, vacuole	16.73	16.85
Solyc01g014910.1.1	Tomato	cytoskeleton, cytosol, nucleus	19.27	16.83
Solyc09g018130.1.1	Tomato	cytoskeleton, cytosol, nucleus	8.36	12.3
KXG26314	Sorghum	nucleus, plastid	28.73	12.23
Solyc12g036430.1.1	Tomato	nucleus	6.91	11.59

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:C5YMJ4	ncoils:Coil	EnsemblPlants:EES14471	ProteinID:EES14471
ProteinID:EES14471.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF98
SMART:SM00353	EnsemblPlantsGene:SORBI_3007G025200	SUPFAM:SSF47459	UniParc:UPI0001A87A71	RefSeq:XP_002444976.1	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:2274126..2277029

Molecular Weight (calculated)

29691.6 Da

IEP (calculated)

10.309

GRAVY (calculated)

-0.266

Length

275 amino acids

Sequence
(BLAST)

001: MASSTTIPAL EENTNAVVVS AGNAADNKEP RKSRRNRMRR IAERKRRSRL RNHFSELESL VPNVTENEKI NDKGDLVEQT IAYIQSLERT KAMLEKRKQQ
101: LALARQVAAS SSSAPPQTAR GKMAPAPVAP LLQPLAAAVP VSAAADDVPQ PQPLVQQPLA VAAAVPPPQP LPVAAAGQGG FQTWSWPNLV LNVSNNNAYI
201: NVCVPRHLGM QNMVMVLSVL NNHGIDVVTT QVDADAARSV LNFYTRVTRM GGGNPSSEEV YKLATSEILL LLNTN

Best Arabidopsis Sequence Match ( AT1G49770.1 )
(BLAST)

001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL

Arabidopsis Description

BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.