Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g014960.1.1 | Tomato | cytosol | 65.62 | 84.34 |
| PGSC0003DMT400095438 | Potato | mitochondrion | 70.94 | 76.95 |
| Solyc01g014910.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 65.31 | 66.35 |
| Solyc01g107950.1.1 | Tomato | nucleus | 57.5 | 60.33 |
| Solyc01g020180.1.1 | Tomato | cytosol | 22.5 | 59.5 |
| Solyc09g018130.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 34.69 | 59.36 |
| Solyc01g107970.1.1 | Tomato | nucleus | 54.06 | 56.91 |
| Solyc01g020170.1.1 | Tomato | nucleus | 52.5 | 55.26 |
| Solyc01g107960.2.1 | Tomato | nucleus | 51.25 | 54.85 |
| Solyc01g057300.1.1 | Tomato | nucleus | 52.5 | 54.72 |
| Solyc12g036430.1.1 | Tomato | nucleus | 23.75 | 46.34 |
| VIT_03s0063g00170.t01 | Wine grape | nucleus | 32.81 | 34.43 |
| GSMUA_Achr9P08780_001 | Banana | nucleus | 30.31 | 32.12 |
| CDY54067 | Canola | nucleus | 27.19 | 29.0 |
| KRH70660 | Soybean | nucleus | 25.0 | 28.88 |
| CDY51046 | Canola | nucleus | 25.94 | 27.67 |
| Bra018796.1-P | Field mustard | nucleus | 25.94 | 27.67 |
| AT1G49770.1 | Thale cress | nucleus | 25.62 | 26.62 |
| CDY69996 | Canola | nucleus | 25.94 | 26.52 |
| Bra040671.1-P | Field mustard | nucleus | 25.94 | 26.52 |
| Zm00001d035154_P001 | Maize | nucleus | 21.88 | 25.83 |
| CDY29335 | Canola | nucleus | 25.0 | 25.56 |
| HORVU6Hr1G020520.2 | Barley | cytosol | 22.19 | 23.91 |
| TraesCS6B01G142000.1 | Wheat | nucleus | 20.31 | 21.67 |
| KXG24316 | Sorghum | nucleus | 21.25 | 21.32 |
| TraesCS6A01G114100.1 | Wheat | nucleus, plastid | 19.69 | 21.0 |
| EES14471 | Sorghum | nucleus, plastid | 17.81 | 20.73 |
| Os04t0429300-01 | Rice | cytosol, nucleus, plastid | 15.31 | 20.33 |
| Os04t0429400-01 | Rice | nucleus | 20.94 | 20.12 |
| KRH70659 | Soybean | cytosol, vacuole | 16.25 | 19.05 |
| EES05218 | Sorghum | nucleus | 19.69 | 18.92 |
| OQU85093 | Sorghum | nucleus | 17.81 | 17.7 |
| Zm00001d003677_P003 | Maize | nucleus | 23.12 | 11.86 |
| KXG26314 | Sorghum | nucleus, plastid | 23.44 | 11.61 |
Protein Annotations
| EnsemblPlants:Solyc09g018150.1.1 | EnsemblPlantsGene:Solyc09g018150.1 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF96 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000276C10D | UniProt:K4CS82 | MapMan:15.5.32 | : | : |
Description
No Description!
Coordinates
chr9:+:13307469..13310066
Molecular Weight (calculated)
35706.4 Da
IEP (calculated)
9.342
GRAVY (calculated)
-0.549
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKKKINGGG ENNHVFPWET NDGWPYLNLN GNQIGIAVTF EGDKLQDPTR FDTYPPLTVV NEVIEPSTNA GKKRSPPNRK KNGKEIVEPN FCIDGAGDRG
101: GLNHDLHIWM ARQRTMKIGI FFNTLRALIS NIPAKADKST IVEKAVNHIQ KLQNTLEKLE QEKLERLQEH NVRCRSSQKF TNTCNNWEKY LGDQGSTHNT
201: SSTTSTTHGT NPLMVNNNIP TGFVTWSSPN VILNVCGENA HISVCYPKKS GLFTFICYIL GKHGIEIVSA QASSDQFRSV FKIQAHAKGG TGIAQYSEAS
301: RVEEMYKQIA IEIISFATPK
101: GLNHDLHIWM ARQRTMKIGI FFNTLRALIS NIPAKADKST IVEKAVNHIQ KLQNTLEKLE QEKLERLQEH NVRCRSSQKF TNTCNNWEKY LGDQGSTHNT
201: SSTTSTTHGT NPLMVNNNIP TGFVTWSSPN VILNVCGENA HISVCYPKKS GLFTFICYIL GKHGIEIVSA QASSDQFRSV FKIQAHAKGG TGIAQYSEAS
301: RVEEMYKQIA IEIISFATPK
001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
Arabidopsis Description
BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.