Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G114100.1 | Wheat | nucleus, plastid | 82.33 | 82.33 |
| HORVU6Hr1G020520.2 | Barley | cytosol | 72.33 | 73.06 |
| Solyc01g020180.1.1 | Tomato | cytosol | 12.67 | 31.41 |
| KRH70660 | Soybean | nucleus | 28.33 | 30.69 |
| VIT_03s0063g00170.t01 | Wine grape | nucleus | 31.0 | 30.49 |
| VIT_18s0001g10300.t01 | Wine grape | nucleus | 29.33 | 30.24 |
| GSMUA_Achr9P08780_001 | Banana | nucleus | 30.0 | 29.8 |
| Solyc01g107960.2.1 | Tomato | nucleus | 29.0 | 29.1 |
| PGSC0003DMT400066257 | Potato | nucleus | 29.0 | 28.52 |
| PGSC0003DMT400066264 | Potato | nucleus | 29.0 | 28.34 |
| PGSC0003DMT400066259 | Potato | nucleus | 29.0 | 28.34 |
| PGSC0003DMT400066261 | Potato | nucleus | 28.67 | 28.29 |
| Zm00001d035154_P001 | Maize | nucleus | 25.33 | 28.04 |
| EES14471 | Sorghum | nucleus, plastid | 25.67 | 28.0 |
| Solyc01g020170.1.1 | Tomato | nucleus | 27.33 | 26.97 |
| PGSC0003DMT400038759 | Potato | cytosol | 21.0 | 26.92 |
| Solyc01g107950.1.1 | Tomato | nucleus | 27.33 | 26.89 |
| Solyc01g107970.1.1 | Tomato | nucleus | 27.0 | 26.64 |
| AT1G49770.1 | Thale cress | nucleus | 27.33 | 26.62 |
| Bra018796.1-P | Field mustard | nucleus | 26.0 | 26.0 |
| CDY51046 | Canola | nucleus | 26.0 | 26.0 |
| CDY54067 | Canola | nucleus | 25.0 | 25.0 |
| KXG24316 | Sorghum | nucleus | 26.33 | 24.76 |
| Solyc01g057300.1.1 | Tomato | nucleus | 25.33 | 24.76 |
| PGSC0003DMT400095438 | Potato | mitochondrion | 24.0 | 24.41 |
| Bra040671.1-P | Field mustard | nucleus | 24.67 | 23.64 |
| CDY69996 | Canola | nucleus | 24.33 | 23.32 |
| CDY29335 | Canola | nucleus | 24.0 | 23.0 |
| Solyc01g014960.1.1 | Tomato | cytosol | 17.33 | 20.88 |
| Solyc01g014910.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 21.67 | 20.63 |
| Solyc09g018150.1.1 | Tomato | nucleus | 21.67 | 20.31 |
| Solyc12g036430.1.1 | Tomato | nucleus | 10.67 | 19.51 |
| Solyc09g018130.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 11.33 | 18.18 |
| KRH70659 | Soybean | cytosol, vacuole | 16.33 | 17.95 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G142000.1 | EnsemblPlantsGene:TraesCS6B01G142000 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF96 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| TIGR:cd00083 | MapMan:15.5.32 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:141673145..141677163
Molecular Weight (calculated)
31741.0 Da
IEP (calculated)
9.084
GRAVY (calculated)
-0.273
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDNDNNAP PATSSDSMSS GKDNKGSKAS SRLVLGGAID KGKGVPKVEE EEEGCRSKGK IMTAPVVAAR RSGGRRGDRE LHIITERERR RRMSEMFTKL
101: HGLLPTLPDK VDKSSIVMEA IHYIKSLEGT VSELEKQKLE RDFARGNPAD AANGGVSSSV AAAMPMAMAT PVTGASAGGI WHTGAAPAPS MSLVGAVTAA
201: PAPVPLQTWS GPNVVLSLSG NNAYIHMSVG RRPGVLTMVT AVLEKHGIDV VTTGISSDHS QCMYTIQARI NGMRNQFGDN VASDDIYKLA VSEIMVWLSE
101: HGLLPTLPDK VDKSSIVMEA IHYIKSLEGT VSELEKQKLE RDFARGNPAD AANGGVSSSV AAAMPMAMAT PVTGASAGGI WHTGAAPAPS MSLVGAVTAA
201: PAPVPLQTWS GPNVVLSLSG NNAYIHMSVG RRPGVLTMVT AVLEKHGIDV VTTGISSDHS QCMYTIQARI NGMRNQFGDN VASDDIYKLA VSEIMVWLSE
001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
Arabidopsis Description
BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.