Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g107970.1.1 | Tomato | nucleus | 85.62 | 84.21 |
| Solyc01g020170.1.1 | Tomato | nucleus | 85.28 | 83.88 |
| PGSC0003DMT400066261 | Potato | nucleus | 77.93 | 76.64 |
| Solyc01g020180.1.1 | Tomato | cytosol | 30.43 | 75.21 |
| Solyc01g107950.1.1 | Tomato | nucleus | 70.57 | 69.18 |
| Solyc01g057300.1.1 | Tomato | nucleus | 67.89 | 66.12 |
| Solyc01g014910.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 58.86 | 55.87 |
| Solyc01g014960.1.1 | Tomato | cytosol | 44.48 | 53.41 |
| Solyc09g018150.1.1 | Tomato | nucleus | 54.85 | 51.25 |
| Solyc09g018130.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 27.09 | 43.32 |
| Solyc12g036430.1.1 | Tomato | nucleus | 23.41 | 42.68 |
| VIT_03s0063g00170.t01 | Wine grape | nucleus | 40.8 | 40.0 |
| KRH70660 | Soybean | nucleus | 32.44 | 35.02 |
| GSMUA_Achr9P08780_001 | Banana | nucleus | 35.12 | 34.77 |
| CDY51046 | Canola | nucleus | 33.78 | 33.67 |
| Bra018796.1-P | Field mustard | nucleus | 33.78 | 33.67 |
| CDY54067 | Canola | nucleus | 33.44 | 33.33 |
| AT1G49770.1 | Thale cress | nucleus | 31.44 | 30.52 |
| CDY69996 | Canola | nucleus | 31.77 | 30.35 |
| Bra040671.1-P | Field mustard | nucleus | 31.44 | 30.03 |
| CDY29335 | Canola | nucleus | 30.43 | 29.07 |
| TraesCS6B01G142000.1 | Wheat | nucleus | 29.1 | 29.0 |
| TraesCS6A01G114100.1 | Wheat | nucleus, plastid | 28.09 | 28.0 |
| HORVU6Hr1G020520.2 | Barley | cytosol | 26.76 | 26.94 |
| Os04t0429300-01 | Rice | cytosol, nucleus, plastid | 21.4 | 26.56 |
| Os04t0429400-01 | Rice | nucleus | 27.09 | 24.32 |
| Zm00001d035154_P001 | Maize | nucleus | 21.74 | 23.99 |
| EES05218 | Sorghum | nucleus | 25.08 | 22.52 |
| EES14471 | Sorghum | nucleus, plastid | 20.4 | 22.18 |
| KRH70659 | Soybean | cytosol, vacuole | 20.07 | 21.98 |
| KXG24316 | Sorghum | nucleus | 23.08 | 21.63 |
| OQU85093 | Sorghum | nucleus | 22.41 | 20.81 |
| Zm00001d003677_P003 | Maize | nucleus | 30.43 | 14.58 |
| KXG26314 | Sorghum | nucleus, plastid | 29.1 | 13.47 |
Protein Annotations
| EnsemblPlants:Solyc01g107960.2.1 | EnsemblPlantsGene:Solyc01g107960.2 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF96 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002768051 | UniProt:K4B312 | MapMan:15.5.32 | : | : |
Description
No Description!
Coordinates
chr1:+:95341776..95344010
Molecular Weight (calculated)
33368.6 Da
IEP (calculated)
7.909
GRAVY (calculated)
-0.637
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MNEGGENNHD HLCDDMWSHL DWNDHQVESG EIEGNKLLDP TGSDTCQPLT FINEVVDVSV NVAKKRSSAN RKKKGKKIAE PNSSVDGAEV RRASKHEVHK
101: WTERERRKKM RTLFETLHAL VPNLPVKADK SKIVYEAANH IRNLQNTFNK LESQKLERLE ENNIMLVGSQ KVGNSWEKYG GDQGSICNSK AITPANHGPT
201: GFMTWSSPNV VLNVAGEDAH ISVCCPKKPG LFTTICYVLE KHKIDTVSAK ISSDQFRSMF MIQAHAKGGS GVAQFSEGFT VEDMYKQAAN EIMLMTTPK
101: WTERERRKKM RTLFETLHAL VPNLPVKADK SKIVYEAANH IRNLQNTFNK LESQKLERLE ENNIMLVGSQ KVGNSWEKYG GDQGSICNSK AITPANHGPT
201: GFMTWSSPNV VLNVAGEDAH ISVCCPKKPG LFTTICYVLE KHKIDTVSAK ISSDQFRSMF MIQAHAKGGS GVAQFSEGFT VEDMYKQAAN EIMLMTTPK
001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
Arabidopsis Description
BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.