Factsheet for Solyc01g014910.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400095438	Potato	mitochondrion	69.21	73.9
Solyc09g018130.1.1	Tomato	cytoskeleton, cytosol, nucleus	43.81	73.8
Solyc01g014960.1.1	Tomato	cytosol	54.92	69.48
Solyc09g018150.1.1	Tomato	nucleus	66.35	65.31
Solyc01g107950.1.1	Tomato	nucleus	61.9	63.93
Solyc01g020180.1.1	Tomato	cytosol	23.81	61.98
Solyc01g107970.1.1	Tomato	nucleus	58.1	60.2
Solyc01g020170.1.1	Tomato	nucleus	58.1	60.2
Solyc01g107960.2.1	Tomato	nucleus	55.87	58.86
Solyc01g057300.1.1	Tomato	nucleus	56.83	58.31
Solyc12g036430.1.1	Tomato	nucleus	24.44	46.95
VIT_03s0063g00170.t01	Wine grape	nucleus	33.33	34.43
GSMUA_Achr9P08780_001	Banana	nucleus	30.16	31.46
CDY54067	Canola	nucleus	27.62	29.0
CDY51046	Canola	nucleus	27.62	29.0
Bra018796.1-P	Field mustard	nucleus	27.62	29.0
KRH70660	Soybean	nucleus	25.4	28.88
CDY69996	Canola	nucleus	27.62	27.8
CDY29335	Canola	nucleus	27.62	27.8
Bra040671.1-P	Field mustard	nucleus	27.3	27.48
AT1G49770.1	Thale cress	nucleus	26.67	27.27
Zm00001d035154_P001	Maize	nucleus	19.68	22.88
HORVU6Hr1G020520.2	Barley	cytosol	20.63	21.89
TraesCS6B01G142000.1	Wheat	nucleus	20.63	21.67
TraesCS6A01G114100.1	Wheat	nucleus, plastid	20.0	21.0
Os04t0429300-01	Rice	cytosol, nucleus, plastid	15.87	20.75
KRH70659	Soybean	cytosol, vacuole	17.46	20.15
EES05218	Sorghum	nucleus	21.27	20.12
KXG24316	Sorghum	nucleus	20.0	19.75
EES14471	Sorghum	nucleus, plastid	16.83	19.27
Os04t0429400-01	Rice	nucleus	20.32	19.22
OQU85093	Sorghum	nucleus	19.05	18.63
KXG26314	Sorghum	nucleus, plastid	23.81	11.61
Zm00001d003677_P003	Maize	nucleus	22.86	11.54

Protein Annotations

EnsemblPlants:Solyc01g014910.1.1	EnsemblPlantsGene:Solyc01g014910.1	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR11514	PANTHER:PTHR11514:SF96	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
SUPFAM:SSF55021	UniParc:UPI00027624FA	UniProt:K4AUC5	MapMan:15.5.32	:	:

Description

No Description!

Coordinates

chr1:+:15818844..15821416

Molecular Weight (calculated)

35379.3 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.400

Length

315 amino acids

Sequence
(BLAST)

001: MNGGGESNHV FPWEIDDVWS YLNMNDNQIG SGAMFEGDMM PDPLRFDTYH PLTVVNEVVG SSTNVAKRRS PPNSKKNGKK IVEPKSSADG VGYREGLEHE
101: IHIWTERERT KKIGILFETL RALIPNISAK ADECTIIDEA VNHILKLKNT FEKLKQKKLD DLQEYNIRLM SSQKFPDVGN SWENYLGDQG TTSNSSFIKP
201: KIHGATPLMV NNNIPTSFMT WSSPDMILNV CGKDAHISVC CPKKLGLFTF ICYVLGKHNI EIVSAQVSSD QSRTMFMIQA HAKCGNDIAQ FSEAPTVEEI
301: YKQVAIRIMS FETPK

Best Arabidopsis Sequence Match ( AT1G49770.1 )
(BLAST)

001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL

Arabidopsis Description

BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.