Factsheet for Os04t0429300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g020180.1.1	Tomato	cytosol	13.28	26.45
Os04t0429400-01	Rice	nucleus	35.68	25.83
VIT_18s0001g10300.t01	Wine grape	nucleus	26.14	21.65
Solyc01g107960.2.1	Tomato	nucleus	26.56	21.4
KRH70660	Soybean	nucleus	24.48	21.3
PGSC0003DMT400066261	Potato	nucleus	25.73	20.39
VIT_03s0063g00170.t01	Wine grape	nucleus	25.31	20.0
Solyc01g107950.1.1	Tomato	nucleus	25.31	20.0
PGSC0003DMT400066257	Potato	nucleus	25.31	20.0
PGSC0003DMT400066264	Potato	nucleus	25.31	19.87
Solyc01g057300.1.1	Tomato	nucleus	25.31	19.87
PGSC0003DMT400066259	Potato	nucleus	24.9	19.54
PGSC0003DMT400038759	Potato	cytosol	18.67	19.23
Solyc01g107970.1.1	Tomato	nucleus	24.07	19.08
Solyc01g020170.1.1	Tomato	nucleus	24.07	19.08
Bra018796.1-P	Field mustard	nucleus	23.65	19.0
CDY51046	Canola	nucleus	23.65	19.0
Bra040671.1-P	Field mustard	nucleus	24.48	18.85
CDY54067	Canola	nucleus	23.24	18.67
PGSC0003DMT400095438	Potato	mitochondrion	22.82	18.64
CDY69996	Canola	nucleus	24.07	18.53
CDY29335	Canola	nucleus	24.07	18.53
AT1G49770.1	Thale cress	nucleus	23.65	18.51
Solyc01g014910.1.1	Tomato	cytoskeleton, cytosol, nucleus	20.75	15.87
Solyc09g018150.1.1	Tomato	nucleus	20.33	15.31
Solyc01g014960.1.1	Tomato	cytosol	15.35	14.86
Solyc12g036430.1.1	Tomato	nucleus	9.54	14.02
Solyc09g018130.1.1	Tomato	cytoskeleton, cytosol, nucleus	10.79	13.9
KRH70659	Soybean	cytosol, vacuole	15.35	13.55

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:4335858	UniProt:A0A0N7KJ26	ProteinID:BAS89241.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlantsGene:Os04g0429300	EnsemblPlants:Os04t0429300-01
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF96	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI000393BCBA	RefSeq:XP_015635110.1	InterPro:bHLH_dom	SEG:seg	:	:

Description

basic helix-loop-helix protein 145Similar to OSIGBa0093L02.4 protein. (Os04t0429300-01)

Coordinates

chr4:+:21271609..21274073

Molecular Weight (calculated)

25932.8 Da

IEP (calculated)

5.865

GRAVY (calculated)

-0.256

Length

241 amino acids

Sequence
(BLAST)

001: MHVLRERERR KEMKNKFEIL HALIPNLPEK TDKATIVEAT INYIKNLQDK IHKMEMLKVE REHAIALATA ATATAAASAD TALQAPPPSE EENEEHDSVV
101: AAATREMALA DMVHAWEQQQ EAAATGGSHG GHAVPPPPPA ASLQTWTGPN MTASLTGDDG FITLSLPHQG GQKNLVAGAV SVLERHHIDV VTATVSASEQ
201: GDNLISLHCH LSPGSSSSQN LTPLDKFKLA MSELMLWVIS V

Best Arabidopsis Sequence Match ( AT1G49770.1 )
(BLAST)

001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL

Arabidopsis Description

BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.