Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g10300.t01 | Wine grape | nucleus | 48.85 | 51.2 |
| GSMUA_Achr9P08780_001 | Banana | nucleus | 47.87 | 48.34 |
| KRH70660 | Soybean | nucleus | 39.67 | 43.68 |
| Solyc01g020180.1.1 | Tomato | cytosol | 16.72 | 42.15 |
| PGSC0003DMT400066257 | Potato | nucleus | 41.64 | 41.64 |
| Solyc01g107960.2.1 | Tomato | nucleus | 40.0 | 40.8 |
| Bra018796.1-P | Field mustard | nucleus | 40.0 | 40.67 |
| CDY51046 | Canola | nucleus | 40.0 | 40.67 |
| Solyc01g107950.1.1 | Tomato | nucleus | 40.66 | 40.66 |
| CDY54067 | Canola | nucleus | 39.67 | 40.33 |
| PGSC0003DMT400066259 | Potato | nucleus | 39.67 | 39.41 |
| PGSC0003DMT400066264 | Potato | nucleus | 39.67 | 39.41 |
| AT1G49770.1 | Thale cress | nucleus | 39.67 | 39.29 |
| PGSC0003DMT400066261 | Potato | nucleus | 39.02 | 39.14 |
| PGSC0003DMT400038759 | Potato | cytosol | 29.84 | 38.89 |
| CDY29335 | Canola | nucleus | 39.67 | 38.66 |
| Solyc01g020170.1.1 | Tomato | nucleus | 38.03 | 38.16 |
| Solyc01g057300.1.1 | Tomato | nucleus | 38.36 | 38.11 |
| Bra040671.1-P | Field mustard | nucleus | 38.69 | 37.7 |
| CDY69996 | Canola | nucleus | 38.69 | 37.7 |
| Solyc01g107970.1.1 | Tomato | nucleus | 37.38 | 37.5 |
| PGSC0003DMT400095438 | Potato | mitochondrion | 36.07 | 37.29 |
| Solyc01g014960.1.1 | Tomato | cytosol | 27.54 | 33.73 |
| Solyc01g014910.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 34.43 | 33.33 |
| Solyc09g018150.1.1 | Tomato | nucleus | 34.43 | 32.81 |
| TraesCS6B01G142000.1 | Wheat | nucleus | 30.49 | 31.0 |
| HORVU6Hr1G020520.2 | Barley | cytosol | 30.16 | 30.98 |
| TraesCS6A01G114100.1 | Wheat | nucleus, plastid | 29.51 | 30.0 |
| Os04t0429400-01 | Rice | nucleus | 29.51 | 27.03 |
| Solyc09g018130.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 16.39 | 26.74 |
| Zm00001d035154_P001 | Maize | nucleus | 23.61 | 26.57 |
| Os04t0429300-01 | Rice | cytosol, nucleus, plastid | 20.0 | 25.31 |
| Solyc12g036430.1.1 | Tomato | nucleus | 12.79 | 23.78 |
| KRH70659 | Soybean | cytosol, vacuole | 20.98 | 23.44 |
| EES05218 | Sorghum | nucleus | 25.25 | 23.12 |
| OQU85093 | Sorghum | nucleus | 24.26 | 22.98 |
| EES14471 | Sorghum | nucleus, plastid | 20.33 | 22.55 |
| KXG24316 | Sorghum | nucleus | 22.95 | 21.94 |
| Zm00001d003677_P003 | Maize | nucleus | 33.77 | 16.51 |
| KXG26314 | Sorghum | nucleus, plastid | 33.77 | 15.94 |
Protein Annotations
| EntrezGene:100264010 | wikigene:100264010 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A5B4T9 | EMBL:AM446591 |
| ProteinID:CAN74162 | ProteinID:CAN74162.1 | ProteinID:CBI32389 | ProteinID:CBI32389.3 | ncoils:Coil | EMBL:FN596006 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | EntrezGene:LOC100264010 | wikigene:LOC100264010 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF98 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000152045C | ArrayExpress:VIT_03s0063g00170 | EnsemblPlantsGene:VIT_03s0063g00170 |
| EnsemblPlants:VIT_03s0063g00170.t01 | RefSeq:XP_002282369 | RefSeq:XP_002282369.1 | InterPro:bHLH_dom | SEG:seg | : |
Description
No Description!
Coordinates
chr3:+:3785857..3788100
Molecular Weight (calculated)
32884.5 Da
IEP (calculated)
8.455
GRAVY (calculated)
-0.610
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGGGHEGF LWENQSWGFS NSDNSGGSDK KSGEKQPGSA SNSQTAATGM DLVPPDKKRG RGGAIKNGKN GKGSGEGNEG KSGGGGGGES DHEIHIWTER
101: ERRKKMRNMF SSLHALLPQL PPKADKSTIV DEAVNYIKTL QHTLQKLQKQ KLERLQGATT VNYEPSIITS QKLAFDSREA FLADQGSSSN LAITPSNSSN
201: SLSVARVPAV FQSWTSPNVT LNVCGNEAQI SVCSPKKPGL LTTICYVLEK HKLEVISAHV SSDYNRSMYM IQTNANGALD QFPVGFPMEE VYKQAAGEIM
301: FWASS
101: ERRKKMRNMF SSLHALLPQL PPKADKSTIV DEAVNYIKTL QHTLQKLQKQ KLERLQGATT VNYEPSIITS QKLAFDSREA FLADQGSSSN LAITPSNSSN
201: SLSVARVPAV FQSWTSPNVT LNVCGNEAQI SVCSPKKPGL LTTICYVLEK HKLEVISAHV SSDYNRSMYM IQTNANGALD QFPVGFPMEE VYKQAAGEIM
301: FWASS
001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
Arabidopsis Description
BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.