Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G142000.1 | Wheat | nucleus | 73.06 | 72.33 |
| TraesCS6A01G114100.1 | Wheat | nucleus, plastid | 71.38 | 70.67 |
| KRH70660 | Soybean | nucleus | 28.96 | 31.05 |
| VIT_03s0063g00170.t01 | Wine grape | nucleus | 30.98 | 30.16 |
| GSMUA_Achr9P08780_001 | Banana | nucleus | 28.96 | 28.48 |
| Zm00001d035154_P001 | Maize | nucleus | 25.93 | 28.41 |
| PGSC0003DMT400066257 | Potato | nucleus | 28.62 | 27.87 |
| VIT_18s0001g10300.t01 | Wine grape | nucleus | 27.27 | 27.84 |
| EES14471 | Sorghum | nucleus, plastid | 25.25 | 27.27 |
| Solyc01g020180.1.1 | Tomato | cytosol | 11.11 | 27.27 |
| PGSC0003DMT400066261 | Potato | nucleus | 27.61 | 26.97 |
| Solyc01g107960.2.1 | Tomato | nucleus | 26.94 | 26.76 |
| Solyc01g107950.1.1 | Tomato | nucleus | 27.27 | 26.56 |
| PGSC0003DMT400066259 | Potato | nucleus | 27.27 | 26.38 |
| Bra018796.1-P | Field mustard | nucleus | 26.6 | 26.33 |
| CDY51046 | Canola | nucleus | 26.6 | 26.33 |
| Solyc01g020170.1.1 | Tomato | nucleus | 26.94 | 26.32 |
| PGSC0003DMT400066264 | Potato | nucleus | 26.94 | 26.06 |
| Solyc01g107970.1.1 | Tomato | nucleus | 26.26 | 25.66 |
| PGSC0003DMT400038759 | Potato | cytosol | 20.2 | 25.64 |
| CDY54067 | Canola | nucleus | 25.59 | 25.33 |
| KXG24316 | Sorghum | nucleus | 26.94 | 25.08 |
| Bra040671.1-P | Field mustard | nucleus | 26.26 | 24.92 |
| CDY69996 | Canola | nucleus | 25.59 | 24.28 |
| CDY29335 | Canola | nucleus | 25.25 | 23.96 |
| AT1G49770.1 | Thale cress | nucleus | 24.58 | 23.7 |
| PGSC0003DMT400095438 | Potato | mitochondrion | 23.23 | 23.39 |
| Solyc01g057300.1.1 | Tomato | nucleus | 23.91 | 23.13 |
| Solyc01g014960.1.1 | Tomato | cytosol | 18.86 | 22.49 |
| Solyc09g018150.1.1 | Tomato | nucleus | 23.91 | 22.19 |
| Solyc01g014910.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 21.89 | 20.63 |
| Solyc12g036430.1.1 | Tomato | nucleus | 11.11 | 20.12 |
| Solyc09g018130.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 12.46 | 19.79 |
| KRH70659 | Soybean | cytosol, vacuole | 16.5 | 17.95 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G020520.2 | EnsemblPlantsGene:HORVU6Hr1G020520 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF96 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000B46FACF | UniProt:A0A287TIT3 | MapMan:15.5.32 | : | : |
Description
No Description!
Coordinates
chrchr6H:-:58461224..58465762
Molecular Weight (calculated)
30449.8 Da
IEP (calculated)
9.567
GRAVY (calculated)
-0.153
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQGNDNHAP PATSSDSMSS GKGGSRLVLG GAMDKGKGVP KVEEEEGCRS KGKIMTAPVV GARSRRDGRS RGRRGDRELH IITERERRRR MSEMFTKLHG
101: LLPTLPDKVD KSSIVMEAIH YIKSLEGTLS ELERHKLXXX XXXXXPAAAA NGGVACSAVA AAPMAMASPV TGLSGCGIWQ TGATPAPSMA LGAVTAAPAP
201: VALQTWSGPN VVLSLSGNNA YIHMSVARRS GVLTMVMAVL EKHGIDVITS GISSDRSQSM FTIQARINGG SNQFGDHVAC DEIYKLAVSE IMVWLSE
101: LLPTLPDKVD KSSIVMEAIH YIKSLEGTLS ELERHKLXXX XXXXXPAAAA NGGVACSAVA AAPMAMASPV TGLSGCGIWQ TGATPAPSMA LGAVTAAPAP
201: VALQTWSGPN VVLSLSGNNA YIHMSVARRS GVLTMVMAVL EKHGIDVITS GISSDRSQSM FTIQARINGG SNQFGDHVAC DEIYKLAVSE IMVWLSE
001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
Arabidopsis Description
BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.