Factsheet for Solyc12g036430.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g018130.1.1	Tomato	cytoskeleton, cytosol, nucleus	39.63	34.76
PGSC0003DMT400066264	Potato	nucleus	59.76	31.92
PGSC0003DMT400066259	Potato	nucleus	58.54	31.27
Solyc01g107950.1.1	Tomato	nucleus	57.32	30.82
Solyc01g014910.1.1	Tomato	cytoskeleton, cytosol, nucleus	46.95	24.44
Solyc01g057300.1.1	Tomato	nucleus	45.73	24.43
Solyc09g018150.1.1	Tomato	nucleus	46.34	23.75
Solyc01g107960.2.1	Tomato	nucleus	42.68	23.41
Solyc01g107970.1.1	Tomato	nucleus	41.46	22.37
Solyc01g020170.1.1	Tomato	nucleus	41.46	22.37
Solyc01g014960.1.1	Tomato	cytosol	29.88	19.68
KRH70660	Soybean	nucleus	21.95	13.0
AT1G49770.1	Thale cress	nucleus	24.39	12.99
VIT_03s0063g00170.t01	Wine grape	nucleus	23.78	12.79
CDY69996	Canola	nucleus	24.39	12.78
Bra040671.1-P	Field mustard	nucleus	24.39	12.78
CDY54067	Canola	nucleus	23.17	12.67
CDY51046	Canola	nucleus	22.56	12.33
Bra018796.1-P	Field mustard	nucleus	22.56	12.33
GSMUA_Achr9P08780_001	Banana	nucleus	22.56	12.25
CDY29335	Canola	nucleus	22.56	11.82
Solyc01g020180.1.1	Tomato	cytosol	8.54	11.57
Os04t0429400-01	Rice	nucleus	22.56	11.11
HORVU6Hr1G020520.2	Barley	cytosol	20.12	11.11
TraesCS6B01G142000.1	Wheat	nucleus	19.51	10.67
TraesCS6A01G114100.1	Wheat	nucleus, plastid	18.29	10.0
Os04t0429300-01	Rice	cytosol, nucleus, plastid	14.02	9.54
EES05218	Sorghum	nucleus	17.68	8.71
KXG24316	Sorghum	nucleus	15.85	8.15
Zm00001d035154_P001	Maize	nucleus	13.41	8.12
OQU85093	Sorghum	nucleus	15.85	8.07
KRH70659	Soybean	cytosol, vacuole	11.59	6.96
EES14471	Sorghum	nucleus, plastid	11.59	6.91
Zm00001d003677_P003	Maize	nucleus	22.56	5.93
KXG26314	Sorghum	nucleus, plastid	22.56	5.73

Protein Annotations

EnsemblPlants:Solyc12g036430.1.1	EnsemblPlantsGene:Solyc12g036430.1	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR11514
PANTHER:PTHR11514:SF96	PFAM:PF00010	SUPFAM:SSF47459	UniParc:UPI000276A1A1	UniProt:K4DEA0	MapMan:15.5.32

Description

No Description!

Coordinates

chr12:+:52082136..52084601

Molecular Weight (calculated)

18843.1 Da

IEP (calculated)

6.364

GRAVY (calculated)

-0.943

Length

164 amino acids

Sequence
(BLAST)

001: MIRGDENNHD FPWETNDFWS YLNLNDNHVG SGETFDGDKL PDLTRSDTCQ PLIVVKEVVQ TTIGVGKKRS PPNRKRNGKE IAESNSDADR AETKRKSEHE
101: IHIWMERERR KKMQTLFETL HSLVPNLPAK AKGGSDTTQF SEEFTVEERF MQAAIQIMPL TTPK

Best Arabidopsis Sequence Match ( AT1G49770.1 )
(BLAST)

001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL

Arabidopsis Description

BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.