CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035154_P001	Maize	nucleus	50.16	59.04
EES14471	Sorghum	nucleus, plastid	38.56	44.73
TraesCS6A01G114100.1	Wheat	nucleus, plastid	25.71	27.33
Solyc01g020180.1.1	Tomato	cytosol	10.34	27.27
HORVU6Hr1G020520.2	Barley	cytosol	25.08	26.94
TraesCS6B01G142000.1	Wheat	nucleus	24.76	26.33
GSMUA_Achr9P08780_001	Banana	nucleus	24.76	26.16
OQU85093	Sorghum	nucleus	26.33	26.09
EES05218	Sorghum	nucleus	26.96	25.83
PGSC0003DMT400038759	Potato	cytosol	18.81	25.64
VIT_18s0001g10300.t01	Wine grape	nucleus	23.2	25.43
Solyc01g107950.1.1	Tomato	nucleus	22.88	23.93
PGSC0003DMT400095438	Potato	mitochondrion	21.94	23.73
PGSC0003DMT400066261	Potato	nucleus	22.57	23.68
PGSC0003DMT400066264	Potato	nucleus	22.57	23.45
Bra040671.1-P	Field mustard	nucleus	22.88	23.32
PGSC0003DMT400066257	Potato	nucleus	22.26	23.28
Solyc01g107960.2.1	Tomato	nucleus	21.63	23.08
CDY69996	Canola	nucleus	22.57	23.0
VIT_03s0063g00170.t01	Wine grape	nucleus	21.94	22.95
KRH70660	Soybean	nucleus	19.75	22.74
PGSC0003DMT400066259	Potato	nucleus	21.63	22.48
AT1G49770.1	Thale cress	nucleus	21.63	22.4
CDY29335	Canola	nucleus	21.63	22.04
Solyc01g020170.1.1	Tomato	nucleus	21.0	22.04
Solyc01g107970.1.1	Tomato	nucleus	21.0	22.04
Bra018796.1-P	Field mustard	nucleus	20.69	22.0
CDY51046	Canola	nucleus	20.69	22.0
Solyc01g057300.1.1	Tomato	nucleus	21.0	21.82
CDY54067	Canola	nucleus	20.38	21.67
Solyc09g018150.1.1	Tomato	nucleus	21.32	21.25
Solyc01g014960.1.1	Tomato	cytosol	16.3	20.88
Solyc01g014910.1.1	Tomato	cytoskeleton, cytosol, nucleus	19.75	20.0
KRH70659	Soybean	cytosol, vacuole	14.42	16.85
Solyc09g018130.1.1	Tomato	cytoskeleton, cytosol, nucleus	9.4	16.04
Solyc12g036430.1.1	Tomato	nucleus	8.15	15.85
KXG26314	Sorghum	nucleus, plastid	23.82	11.76

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A1B6PF71	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KXG24316
ProteinID:KXG24316	ProteinID:KXG24316.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF98
SMART:SM00353	EnsemblPlantsGene:SORBI_3007G025300	SUPFAM:SSF47459	UniParc:UPI00081ABCBA	InterPro:bHLH_dom	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:2281897..2284805

Molecular Weight (calculated)

33939.4 Da

IEP (calculated)

6.403

GRAVY (calculated)

-0.220

Length

319 amino acids

Sequence
(BLAST)

001: MENHHSSAAP PNAKDGSSGI PEENKDVAVP NLSSAPEVAA TVAASNDDDV SKGKNVVAAD NEELKPHIVS ERSRRNRLRD YFGELKAYIP QIPEKSDKAT
101: IVEHAIDYIK YLEKMKAMLE KRKQELALAR QVGVVAAASS SSAPPPPPPP PPQTSHGMAV AAMPSDVPAG ACSYVPPPPP PQPAVPVPAP QLLPATMSSD
201: VVPQPQPLQP APPQARIITA TPVGFQTWSW PDLVLSVSND TAHISVSAPR HRGMWTKVMV LSVLNKYGID VVTAQVDSDA VRSVFNIYAR VTAMGGGNPS
301: ALEVYQLAVS EILVWLTTS

Best Arabidopsis Sequence Match ( AT1G49770.1 )
(BLAST)

001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL

Arabidopsis Description

BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.