CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05218	Sorghum	nucleus	49.38	47.75
EES14471	Sorghum	nucleus, plastid	23.6	27.64
Solyc01g020180.1.1	Tomato	cytosol	9.94	26.45
KXG24316	Sorghum	nucleus	26.09	26.33
GSMUA_Achr9P08780_001	Banana	nucleus	22.98	24.5
VIT_03s0063g00170.t01	Wine grape	nucleus	22.98	24.26
PGSC0003DMT400066257	Potato	nucleus	22.05	23.28
PGSC0003DMT400066264	Potato	nucleus	21.74	22.8
Solyc01g107960.2.1	Tomato	nucleus	20.81	22.41
Solyc01g020170.1.1	Tomato	nucleus	21.12	22.37
Solyc01g107950.1.1	Tomato	nucleus	21.12	22.3
PGSC0003DMT400038759	Potato	cytosol	16.15	22.22
PGSC0003DMT400066259	Potato	nucleus	21.12	22.15
Solyc01g057300.1.1	Tomato	nucleus	20.5	21.5
Solyc01g107970.1.1	Tomato	nucleus	19.88	21.05
PGSC0003DMT400066261	Potato	nucleus	19.88	21.05
KRH70660	Soybean	nucleus	17.7	20.58
PGSC0003DMT400095438	Potato	mitochondrion	18.63	20.34
VIT_18s0001g10300.t01	Wine grape	nucleus	18.32	20.27
Solyc01g014910.1.1	Tomato	cytoskeleton, cytosol, nucleus	18.63	19.05
KRH70659	Soybean	cytosol, vacuole	15.22	17.95
Solyc09g018150.1.1	Tomato	nucleus	17.7	17.81
Solyc01g014960.1.1	Tomato	cytosol	13.66	17.67
AT1G49770.1	Thale cress	nucleus	16.15	16.88
CDY54067	Canola	nucleus	15.22	16.33
Bra040671.1-P	Field mustard	nucleus	15.84	16.29
Solyc09g018130.1.1	Tomato	cytoskeleton, cytosol, nucleus	9.32	16.04
CDY51046	Canola	nucleus	14.91	16.0
Bra018796.1-P	Field mustard	nucleus	14.91	16.0
CDY69996	Canola	nucleus	15.53	15.97
Solyc12g036430.1.1	Tomato	nucleus	8.07	15.85
CDY29335	Canola	nucleus	15.22	15.65
KXG26314	Sorghum	nucleus, plastid	26.71	13.31

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:8061042	UniProt:A0A1Z5RMY2	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:OQU85093
ProteinID:OQU85093	ProteinID:OQU85093.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF98
SMART:SM00353	EnsemblPlantsGene:SORBI_3004G171600	SUPFAM:SSF47459	UniParc:UPI0001A85770	RefSeq:XP_002452243.1	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:52410813..52413891

Molecular Weight (calculated)

33932.0 Da

IEP (calculated)

6.260

GRAVY (calculated)

-0.430

Length

322 amino acids

Sequence
(BLAST)

001: MAQNGPHGHQ VDAAASDDGH RAPPTTVAFS LTSAGPYGNA GSSAGNMENL DASASKGKNL IPDLNMEERD DSAGGSKDKP RSEAELVVPA ADADADAGAD
101: KGKSVAAADD GEPTVNIALE PEKRKRMKDL FRELRDLMPH VPRKTDKVAL MGEAIKYIRA LEEKAAMLGK QVLARPPPAA ARGEASSSSS SSLTAAMMPD
201: VPRGWGGVPA VPPAGPAVPA SPPLRCNTWT WPNVALTVAN ENACISVCVP RRANNTLSML MSVLDNHGID VITSQISSDR ARDMFMIYGH VTGIGGENRR
301: SAEEVYQRAV SEIKCRLNNS NT

Best Arabidopsis Sequence Match ( AT1G49770.1 )
(BLAST)

001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL

Arabidopsis Description

BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.