CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003677_P003	Maize	nucleus	33.59	34.78
Solyc01g020180.1.1	Tomato	cytosol	6.5	34.71
GSMUA_Achr9P08780_001	Banana	nucleus	16.1	34.44
VIT_03s0063g00170.t01	Wine grape	nucleus	15.94	33.77
Bra018796.1-P	Field mustard	nucleus	15.48	33.33
AT1G49770.1	Thale cress	nucleus	15.79	33.12
CDY51046	Canola	nucleus	15.33	33.0
CDY54067	Canola	nucleus	15.17	32.67
Os04t0429400-01	Rice	nucleus	16.72	32.43
VIT_18s0001g10300.t01	Wine grape	nucleus	14.4	31.96
KRH70660	Soybean	nucleus	13.47	31.41
Bra040671.1-P	Field mustard	nucleus	15.02	30.99
CDY69996	Canola	nucleus	14.86	30.67
PGSC0003DMT400066264	Potato	nucleus	14.55	30.62
PGSC0003DMT400066257	Potato	nucleus	14.24	30.16
CDY29335	Canola	nucleus	14.55	30.03
PGSC0003DMT400066261	Potato	nucleus	13.78	29.28
Solyc01g107960.2.1	Tomato	nucleus	13.47	29.1
PGSC0003DMT400066259	Potato	nucleus	13.78	28.99
EES14471	Sorghum	nucleus, plastid	12.23	28.73
Solyc01g107950.1.1	Tomato	nucleus	13.47	28.52
Solyc01g107970.1.1	Tomato	nucleus	13.16	27.96
EES05218	Sorghum	nucleus	14.24	27.63
PGSC0003DMT400038759	Potato	cytosol	9.91	27.35
Solyc01g020170.1.1	Tomato	nucleus	12.85	27.3
PGSC0003DMT400095438	Potato	mitochondrion	12.38	27.12
Solyc01g057300.1.1	Tomato	nucleus	12.85	27.04
OQU85093	Sorghum	nucleus	13.31	26.71
KXG24316	Sorghum	nucleus	11.76	23.82
Solyc01g014910.1.1	Tomato	cytoskeleton, cytosol, nucleus	11.61	23.81
Solyc09g018150.1.1	Tomato	nucleus	11.61	23.44
Solyc01g014960.1.1	Tomato	cytosol	8.98	23.29
Solyc12g036430.1.1	Tomato	nucleus	5.73	22.56
Solyc09g018130.1.1	Tomato	cytoskeleton, cytosol, nucleus	6.5	22.46
KRH70659	Soybean	cytosol, vacuole	8.36	19.78

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A1B6PKW6	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KXG26314
ProteinID:KXG26314	ProteinID:KXG26314.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF96
SMART:SM00353	EnsemblPlantsGene:SORBI_3006G080500	SUPFAM:SSF47459	UniParc:UPI00081ACD00	InterPro:bHLH_dom	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:44905218..44909416

Molecular Weight (calculated)

65452.5 Da

IEP (calculated)

9.233

GRAVY (calculated)

-0.276

Length

646 amino acids

Sequence
(BLAST)

001: MSQEGANLPQ EVEGSHDQAT APHGSIPANA GSPTATVMSA GSNPSSVSKL ASAVNNAGLS ERASPAVLSA GEDSNAASSK IASPAVLQAG EDSSAASKIS
101: SPAVLLAGEE NKVELKLASP TVLLAGEEKG NDAAGSKLAS PAMLHDYDNS KAGSHAGVDN NAARSEVASP AVLHAGDGNN GGSKIASPAV PQAIVENPTG
201: SKLDSPAVLH ADEHNNAGFK VPNPAVLHAS KDMDNNTERP KFGSSLLLHA GKDNKARTKL AIQAMSHASG NAGSSRLTRS AAAALHAAKS NASNLAIQVA
301: PRHHAGKDNI AGSSKAARPA AVGAGAGESN AKEGKNNIAR GQQRALEADV GGGSGKGNAA ALEDTDHDLH IFTERERRKK MKNMFSTLHA LLPDLPDKAD
401: KATIVGEAVT YIKSLEGTVE KLEKMKLQRK RALAAQQQLQ QHGQQLLVGA GSGSSRASSA RHPAPALPAP AAPAPAPAAS SSREASLADM VHSLEVQQAS
501: VAAANRALAV AAAAAAAGGS GSGSSSGAAA ANALSLPRGA VPFPAPATGF QTWSGQNVVV SVANNEAYIN LHCPREPGTL TKVLFVLERH SIEVVTTTIS
601: AHDGFRMYGI HARANPASAS ARFPQNLGAE DRFKLAVSEI VQLINI

Best Arabidopsis Sequence Match ( AT1G49770.1 )
(BLAST)

001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL

Arabidopsis Description

BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.