Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0429300-01 | Rice | cytosol, nucleus, plastid | 25.83 | 35.68 |
| GSMUA_Achr9P08780_001 | Banana | nucleus | 28.53 | 31.46 |
| VIT_18s0001g10300.t01 | Wine grape | nucleus | 27.03 | 30.93 |
| Solyc01g020180.1.1 | Tomato | cytosol | 11.11 | 30.58 |
| VIT_03s0063g00170.t01 | Wine grape | nucleus | 27.03 | 29.51 |
| KRH70660 | Soybean | nucleus | 24.02 | 28.88 |
| Solyc01g107950.1.1 | Tomato | nucleus | 26.13 | 28.52 |
| Solyc01g107960.2.1 | Tomato | nucleus | 24.32 | 27.09 |
| PGSC0003DMT400066264 | Potato | nucleus | 24.32 | 26.38 |
| Solyc01g107970.1.1 | Tomato | nucleus | 24.02 | 26.32 |
| PGSC0003DMT400066257 | Potato | nucleus | 24.02 | 26.23 |
| PGSC0003DMT400066259 | Potato | nucleus | 24.02 | 26.06 |
| Bra018796.1-P | Field mustard | nucleus | 23.42 | 26.0 |
| CDY51046 | Canola | nucleus | 23.42 | 26.0 |
| CDY54067 | Canola | nucleus | 23.42 | 26.0 |
| AT1G49770.1 | Thale cress | nucleus | 24.02 | 25.97 |
| Solyc01g020170.1.1 | Tomato | nucleus | 23.42 | 25.66 |
| PGSC0003DMT400066261 | Potato | nucleus | 23.12 | 25.33 |
| Bra040671.1-P | Field mustard | nucleus | 23.72 | 25.24 |
| CDY69996 | Canola | nucleus | 23.42 | 24.92 |
| PGSC0003DMT400038759 | Potato | cytosol | 17.42 | 24.79 |
| CDY29335 | Canola | nucleus | 22.82 | 24.28 |
| Solyc01g057300.1.1 | Tomato | nucleus | 21.92 | 23.78 |
| PGSC0003DMT400095438 | Potato | mitochondrion | 20.72 | 23.39 |
| Solyc12g036430.1.1 | Tomato | nucleus | 11.11 | 22.56 |
| Solyc09g018150.1.1 | Tomato | nucleus | 20.12 | 20.94 |
| Solyc01g014910.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 19.22 | 20.32 |
| Solyc01g014960.1.1 | Tomato | cytosol | 15.02 | 20.08 |
| Solyc09g018130.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 11.11 | 19.79 |
| Zm00001d003677_P003 | Maize | nucleus | 31.83 | 16.99 |
| KXG26314 | Sorghum | nucleus, plastid | 32.43 | 16.72 |
| KRH70659 | Soybean | cytosol, vacuole | 12.91 | 15.75 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:4335859 | EMBL:AK108728 | ProteinID:BAF14724.1 | ProteinID:BAS89242.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | EnsemblPlantsGene:Os04g0429400 | EnsemblPlants:Os04t0429400-01 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF96 | UniProt:Q0JD63 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000021C699 | RefSeq:XP_015636599.1 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
basic helix-loop-helix protein 144, endosperm-specific gene 65Helix-loop-helix DNA-binding domain containing protein. (Os04t0429400-01)
Coordinates
chr4:+:21276704..21279864
Molecular Weight (calculated)
35317.9 Da
IEP (calculated)
9.352
GRAVY (calculated)
-0.320
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQEGADLSQ DVDESPYHTA VVTTNNLVRS IKAEKSNSSS SSGKPVETDI GLKVASPTMF GFNTKIEGTG KNMAVKREEG EGGGRPGVSS GVSTRDTNGK
101: GKNAMDMEHA LHIWTERERR KKMKNMFSTL HGLLPKIPGK TDKASIVGEA IGYIKTLEDV VQKLETIKTE RVRAHQWAAA AAAAVAANGG GEGSSHSHSQ
201: PPRHATAVTV AVAEPAPVAA AVNAQAPQKK AAAAAAPTLQ TWSAPNITLT MAGVDAFINM CLPRQRASFT TVAFVLEKHQ IDVVTSTISA DHDKSLFSVH
301: VRLNEASLQS TEGLTPEAKY KLAVSELMVR LAE
101: GKNAMDMEHA LHIWTERERR KKMKNMFSTL HGLLPKIPGK TDKASIVGEA IGYIKTLEDV VQKLETIKTE RVRAHQWAAA AAAAVAANGG GEGSSHSHSQ
201: PPRHATAVTV AVAEPAPVAA AVNAQAPQKK AAAAAAPTLQ TWSAPNITLT MAGVDAFINM CLPRQRASFT TVAFVLEKHQ IDVVTSTISA DHDKSLFSVH
301: VRLNEASLQS TEGLTPEAKY KLAVSELMVR LAE
001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
Arabidopsis Description
BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.