Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0063g00170.t01 | Wine grape | nucleus | 43.68 | 39.67 |
| GSMUA_Achr9P08780_001 | Banana | nucleus | 37.91 | 34.77 |
| CDY54067 | Canola | nucleus | 36.46 | 33.67 |
| PGSC0003DMT400066257 | Potato | nucleus | 36.46 | 33.11 |
| Solyc01g107950.1.1 | Tomato | nucleus | 36.1 | 32.79 |
| CDY51046 | Canola | nucleus | 35.38 | 32.67 |
| PGSC0003DMT400066261 | Potato | nucleus | 35.74 | 32.57 |
| Solyc01g107960.2.1 | Tomato | nucleus | 35.02 | 32.44 |
| Bra018796.1-P | Field mustard | nucleus | 35.02 | 32.33 |
| Solyc01g020180.1.1 | Tomato | cytosol | 14.08 | 32.23 |
| CDY29335 | Canola | nucleus | 36.1 | 31.95 |
| Bra040671.1-P | Field mustard | nucleus | 35.74 | 31.63 |
| PGSC0003DMT400066259 | Potato | nucleus | 34.66 | 31.27 |
| CDY69996 | Canola | nucleus | 35.02 | 30.99 |
| Solyc01g107970.1.1 | Tomato | nucleus | 33.94 | 30.92 |
| AT1G49770.1 | Thale cress | nucleus | 34.3 | 30.84 |
| PGSC0003DMT400066264 | Potato | nucleus | 33.94 | 30.62 |
| Solyc01g020170.1.1 | Tomato | nucleus | 32.49 | 29.61 |
| HORVU6Hr1G020520.2 | Barley | cytosol | 31.05 | 28.96 |
| KRH70659 | Soybean | cytosol, vacuole | 28.52 | 28.94 |
| TraesCS6B01G142000.1 | Wheat | nucleus | 30.69 | 28.33 |
| Solyc01g057300.1.1 | Tomato | nucleus | 31.05 | 28.01 |
| TraesCS6A01G114100.1 | Wheat | nucleus, plastid | 29.96 | 27.67 |
| PGSC0003DMT400038759 | Potato | cytosol | 23.1 | 27.35 |
| Solyc01g014960.1.1 | Tomato | cytosol | 24.19 | 26.91 |
| PGSC0003DMT400095438 | Potato | mitochondrion | 28.52 | 26.78 |
| Solyc01g014910.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 28.88 | 25.4 |
| Solyc09g018150.1.1 | Tomato | nucleus | 28.88 | 25.0 |
| Os04t0429300-01 | Rice | cytosol, nucleus, plastid | 21.3 | 24.48 |
| Zm00001d035154_P001 | Maize | nucleus | 23.83 | 24.35 |
| Os04t0429400-01 | Rice | nucleus | 28.88 | 24.02 |
| Solyc12g036430.1.1 | Tomato | nucleus | 13.0 | 21.95 |
| EES05218 | Sorghum | nucleus | 25.99 | 21.62 |
| Solyc09g018130.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 14.44 | 21.39 |
| EES14471 | Sorghum | nucleus, plastid | 20.58 | 20.73 |
| KXG24316 | Sorghum | nucleus | 22.74 | 19.75 |
| OQU85093 | Sorghum | nucleus | 20.58 | 17.7 |
| KXG26314 | Sorghum | nucleus, plastid | 31.41 | 13.47 |
| Zm00001d003677_P003 | Maize | nucleus | 30.32 | 13.46 |
Protein Annotations
| EntrezGene:102665879 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02000789 | ncoils:Coil | EnsemblPlantsGene:GLYMA_02G103200 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:K7K7J0 | EnsemblPlants:KRH70660 | ProteinID:KRH70660 | ProteinID:KRH70660.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF98 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000296F7D7 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:9795987..9799196
Molecular Weight (calculated)
31096.8 Da
IEP (calculated)
6.048
GRAVY (calculated)
-0.516
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLLTVEDQS LHDMNFLWEN HSWDPSNSDN SGESKENMKS LDQVEEKDEA LMNKKRNRDQ GNITSGEGKG EKCRESDHEM HIWTERERRK KMRNMFASLH
101: ALLPHLPSKA DKSTVVDEAV AYIKNLEKTL EKLEKQKQER VQCVSTFGCE PSMFVTGQGS SNNNISNAII GTTSNALSFP VAFDKTWASA NLVLNIFGDE
201: AQFSICTAHK PGLMTTIGFV LEKYKIEVIT ANISCIGYGN ACMIQAHGKR VSHQFLDANS VEEIYKQAAG EIMLWIG
101: ALLPHLPSKA DKSTVVDEAV AYIKNLEKTL EKLEKQKQER VQCVSTFGCE PSMFVTGQGS SNNNISNAII GTTSNALSFP VAFDKTWASA NLVLNIFGDE
201: AQFSICTAHK PGLMTTIGFV LEKYKIEVIT ANISCIGYGN ACMIQAHGKR VSHQFLDANS VEEIYKQAAG EIMLWIG
001: MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
101: PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP
201: YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE
301: LVLYFSSL
Arabidopsis Description
BHLH95Transcription factor bHLH95 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.