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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G182800.1 Wheat mitochondrion 99.38 99.38
TraesCS2B01G201800.1 Wheat mitochondrion 98.76 98.76
HORVU2Hr1G032910.2 Barley plastid 96.27 92.99
Os07t0603900-01 Rice mitochondrion 85.68 84.98
EER97500 Sorghum mitochondrion 84.02 83.68
Zm00001d006822_P001 Maize mitochondrion 81.54 81.2
GSMUA_Achr2P06230_001 Banana mitochondrion 61.2 57.5
KRH34092 Soybean mitochondrion 46.06 43.61
KRG92684 Soybean mitochondrion, plastid 45.85 43.42
Bra012992.1-P Field mustard mitochondrion 46.27 43.3
VIT_17s0000g05090.t01 Wine grape mitochondrion 45.64 41.35
AT5G60960.1 Thale cress plastid 44.61 41.27
Solyc03g114920.1.1 Tomato mitochondrion 43.98 40.61
PGSC0003DMT400063323 Potato mitochondrion 43.57 40.31
TraesCS3A01G389400.1 Wheat mitochondrion 20.54 20.16
Protein Annotations
Gene3D:1.25.40.10MapMan:17.7.1.3.1GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003729
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0005739InterPro:IPR002885InterPro:IPR011990PFAM:PF01535PFAM:PF13041
PFAM:PF13812PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF831InterPro:Pentatricopeptide_repeatTIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sfEnsemblPlantsGene:TraesCS2A01G175500EnsemblPlants:TraesCS2A01G175500.1SEG:seg::
Description
No Description!
Coordinates
chr2A:-:133961452..133962900
Molecular Weight (calculated)
53566.3 Da
IEP (calculated)
10.538
GRAVY (calculated)
-0.250
Length
482 amino acids
Sequence
(BLAST)
001: MWRRHLLRRL LPSPATAGTP SPLVRHLSTT PTPSSTTDTT SIASSLAAAV TKLSSTPPPA TSPDAYFSLH FSDVRPTNAL LAETLSLSPP ATSRAAADLF
101: RFLVRRSLHP SDGALALVVR HLARRRDFPA VRTLLQEFPS ALGPDTVDAY LFHLARAGRA TDALKVFDEL PGELRTRGAL TSLVSSLSSE GFPQLAERAV
201: KKIAHEIFPD DNICTLLVSG YADAGKLDHA LRLIGETRNG GFQPGLDAYN AVLDCVCRLC RKKDPLRMPV EAEKFLVDME ANGIPRDAGT FRVLIKNLCK
301: IRRTEDAMNL FRQMGEWGCS PDADTYLVLI KSLYQAARTS EGDELMIWMR SAGFGDKLDR KAYYGFIKVL CGIERVEHAV KVFRLMKGYG HAPGTKSYSL
401: LIEKLASHNL GDRSNALFRE AVARGVTVTP GVYKIDKRYV KEKKEKKVKK KLTLPEKKIL KSKRLYKLKM SFVKKPKRRM RA
Best Arabidopsis Sequence Match ( AT5G60960.1 )
(BLAST)
001: MPPSLPSLQL RRLLLRSFIS SSSVNTLQSQ PRIISSKPLF SPLPPSRSSI FSTFPSRFFS SETNAESESL DSNEIALSFS KELTGNPDAE SQTISQRFNL
101: SFSHITPNPD LILQTLNLSP EAGRAALGFN EWLDSNSNFS HTDETVSFFV DYFGRRKDFK GMLEIISKYK GIAGGKTLES AIDRLVRAGR PKQVTDFFEK
201: MENDYGLKRD KESLTLVVKK LCEKGHASIA EKMVKNTANE IFPDENICDL LISGWCIAEK LDEATRLAGE MSRGGFEIGT KAYNMMLDCV CKLCRKKDPF
301: KLQPEVEKVL LEMEFRGVPR NTETFNVLIN NLCKIRRTEE AMTLFGRMGE WGCQPDAETY LVLIRSLYQA ARIGEGDEMI DKMKSAGYGE LLNKKEYYGF
401: LKILCGIERL EHAMSVFKSM KANGCKPGIK TYDLLMGKMC ANNQLTRANG LYKEAAKKGI AVSPKEYRVD PRFMKKKTKE VDSNVKKRET LPEKTARKKK
501: RLKQINMSFV KKPHNKMRRR M
Arabidopsis Description
PNM1PNM1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8V9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.