Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G536800.1 | Wheat | cytosol, plastid | 76.43 | 70.18 |
| TraesCS4A01G337100.1 | Wheat | mitochondrion, plastid | 73.89 | 69.46 |
| TraesCS4A01G337200.1 | Wheat | cytosol | 73.89 | 67.05 |
| Os03t0847900-01 | Rice | cytosol, peroxisome, plastid | 57.96 | 54.82 |
| HORVU5Hr1G121080.2 | Barley | endoplasmic reticulum, golgi | 73.25 | 49.57 |
| OQU90622 | Sorghum | cytosol | 49.68 | 43.58 |
| Zm00001d034836_P001 | Maize | cytosol, nucleus, peroxisome | 47.77 | 39.27 |
| CDX69448 | Canola | cytosol | 29.3 | 30.26 |
| Bra008619.1-P | Field mustard | cytosol | 29.3 | 30.07 |
| VIT_04s0023g00400.t01 | Wine grape | cytosol | 27.39 | 29.86 |
| CDY55580 | Canola | cytosol | 28.66 | 29.61 |
| VIT_05s0062g01090.t01 | Wine grape | cytosol, mitochondrion, nucleus | 29.94 | 29.56 |
| CDY38108 | Canola | cytosol | 28.66 | 28.85 |
| AT5G16490.1 | Thale cress | cytosol, extracellular | 28.03 | 28.76 |
| PGSC0003DMT400011671 | Potato | cytosol | 29.94 | 28.14 |
| KRH45224 | Soybean | cytosol, nucleus, plastid | 30.57 | 27.91 |
| CDX85503 | Canola | cytosol | 15.29 | 27.59 |
| KRH00915 | Soybean | mitochondrion | 31.21 | 27.53 |
| KRG92567 | Soybean | cytosol, golgi, plastid | 28.03 | 27.5 |
| PGSC0003DMT400055683 | Potato | plastid | 26.75 | 27.27 |
| KRH40309 | Soybean | mitochondrion | 29.94 | 27.17 |
| KRH01538 | Soybean | cytosol, mitochondrion | 29.3 | 26.59 |
| TraesCS3A01G423700.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 33.12 | 25.87 |
| Solyc11g008880.1.1 | Tomato | mitochondrion | 26.11 | 24.12 |
| PGSC0003DMT400041700 | Potato | mitochondrion | 24.84 | 22.29 |
| GSMUA_Achr10P... | Banana | plastid | 32.48 | 7.15 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G337000.1 | EnsemblPlantsGene:TraesCS4A01G337000 | InterPro:CRIB_dom | InterPro:IPR000095 | PANTHER:PTHR23177 | PANTHER:PTHR23177:SF18 |
| PFAM:PF00786 | PFscan:PS50108 | SEG:seg | SMART:SM00285 | TIGR:cd00132 | MapMan:27.4.5.2 |
Description
No Description!
Coordinates
chr4A:+:619312282..619312990
Molecular Weight (calculated)
16643.5 Da
IEP (calculated)
4.591
GRAVY (calculated)
-0.447
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDRAGFHFS IGCMSQSAVA VADPLRKKPP APAPQQQADN PSSSSITTQD RAPREEGTGG DEKAKEGIVA AGVQRLLKGI KTFFAAYDGE EEEEEEEREI
101: VIGYPTDVQH VGHIGWDGLN KVGGMGMVGA FSVPSSLPLR QLEIAMDPGA ATTTCTN
101: VIGYPTDVQH VGHIGWDGLN KVGGMGMVGA FSVPSSLPLR QLEIAMDPGA ATTTCTN
001: MKDRMERLLI LPFSLGCSTQ SCVAVATTHQ QKKPNQLIKR REESHENGSF EKEYTKMDRN GANMLDGRVE SDAKGSFRKD YTKMENNNNG ANISDGIYRI
101: IRSFKSFSHF FIRYEEETKE REAEMEIGFP TDVKHLSHIG VDGTMTTFDN TSSSFPFSGF HLTGTVV
101: IRSFKSFSHF FIRYEEETKE REAEMEIGFP TDVKHLSHIG VDGTMTTFDN TSSSFPFSGF HLTGTVV
Arabidopsis Description
RIC2RIC2 [Source:UniProtKB/TrEMBL;Acc:A0A178WAB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.