Factsheet for HORVU5Hr1G121080.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 6
plastid 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G337100.1	Wheat	mitochondrion, plastid	55.6	77.25
TraesCS5D01G534200.1	Wheat	cytosol	54.31	74.56
TraesCS4A01G337000.1	Wheat	cytosol, plastid	49.57	73.25
TraesCS5B01G536800.1	Wheat	cytosol, plastid	52.59	71.34
TraesCS4A01G337200.1	Wheat	cytosol	52.16	69.94
TraesCS5D01G534300.1	Wheat	cytosol	48.71	65.32
TraesCS5B01G536700.1	Wheat	cytosol	47.41	65.09
Os03t0847900-01	Rice	cytosol, peroxisome, plastid	42.24	59.04
OQU90622	Sorghum	cytosol	34.91	45.25
Zm00001d034836_P001	Maize	cytosol, nucleus, peroxisome	33.62	40.84
KRH00915	Soybean	mitochondrion	23.28	30.34
VIT_05s0062g01090.t01	Wine grape	cytosol, mitochondrion, nucleus	20.69	30.19
VIT_04s0023g00400.t01	Wine grape	cytosol	18.53	29.86
KRH40309	Soybean	mitochondrion	21.98	29.48
CDX69448	Canola	cytosol	18.97	28.95
AT5G16490.1	Thale cress	cytosol, extracellular	18.97	28.76
Bra008619.1-P	Field mustard	cytosol	18.97	28.76
CDX85503	Canola	cytosol	10.78	28.74
CDY55580	Canola	cytosol	18.53	28.29
CDY38108	Canola	cytosol	18.97	28.21
KRG92567	Soybean	cytosol, golgi, plastid	19.4	28.12
HORVU3Hr1G093570.4	Barley	mitochondrion	23.28	27.84
PGSC0003DMT400011671	Potato	cytosol	19.83	27.54
KRH45224	Soybean	cytosol, nucleus, plastid	20.26	27.33
KRH01538	Soybean	cytosol, mitochondrion	19.83	26.59
PGSC0003DMT400055683	Potato	plastid	17.24	25.97
Solyc11g008880.1.1	Tomato	mitochondrion	16.81	22.94
PGSC0003DMT400041700	Potato	mitochondrion	16.81	22.29
GSMUA_Achr10P...	Banana	plastid	23.28	7.57

Protein Annotations

EnsemblPlants:HORVU5Hr1G121080.2	EnsemblPlantsGene:HORVU5Hr1G121080	InterPro:CRIB_dom	InterPro:IPR000095	PANTHER:PTHR23177	PANTHER:PTHR23177:SF53
PFAM:PF00786	PFscan:PS50108	SEG:seg	SignalP:SignalP-noTM	SMART:SM00285	UniParc:UPI000296CAD8
UniProt:M0XRH6	MapMan:27.4.5.2	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:658972554..658974377

Molecular Weight (calculated)

24324.9 Da

IEP (calculated)

5.007

GRAVY (calculated)

-0.124

Length

232 amino acids

Sequence
(BLAST)

001: MMMMPCLRLS AFCLSLSPNL ALLSFASLPF PCSPCTAYKT CPANNATPFR LHLSSSSSHP LHPPWSPAPM KDRRAGAGFP FSIGCMSQSA VAVADPLEKK
101: PMPPPPAQQQ ADAPSSSTTA ATTQERGAGE ESGEDKARNA AASGIVSAGV QRLLKGIKTF FAAYDGDEEE DEDEAEIVIG FPTDVQHVGH IGWDGINKVG
201: GMVGAFSLPS SLSLRQLEIA MDPGASTTTC IN

Best Arabidopsis Sequence Match ( AT5G16490.1 )
(BLAST)

001: MRDRMERLVV LPFSIGCISV SSVAVLSPLS KPHHHHSRQV IREQEEEDNM KNVFKFLAVS KPEISIGINR IFKSFKTISQ LFADKDEEKE EVETSGMEIG
101: VPTNVKHVSH IGWESGLTAA TGPGKGWEDL IPPELLAAAA SKKEINPHLH PTL

Arabidopsis Description

RIC4CRIB domain-containing protein RIC4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFD5]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.