Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G536800.1 | Wheat | cytosol, plastid | 73.96 | 73.1 |
| TraesCS5D01G534300.1 | Wheat | cytosol | 71.01 | 69.36 |
| TraesCS4A01G337200.1 | Wheat | cytosol | 65.09 | 63.58 |
| Os03t0847900-01 | Rice | cytosol, peroxisome, plastid | 54.44 | 55.42 |
| OQU90622 | Sorghum | cytosol | 52.07 | 49.16 |
| HORVU5Hr1G121080.2 | Barley | endoplasmic reticulum, golgi | 65.09 | 47.41 |
| Zm00001d034836_P001 | Maize | cytosol, nucleus, peroxisome | 48.52 | 42.93 |
| VIT_04s0023g00400.t01 | Wine grape | cytosol | 27.22 | 31.94 |
| CDY55580 | Canola | cytosol | 27.81 | 30.92 |
| PGSC0003DMT400011671 | Potato | cytosol | 30.18 | 30.54 |
| CDX69448 | Canola | cytosol | 27.22 | 30.26 |
| Bra008619.1-P | Field mustard | cytosol | 27.22 | 30.07 |
| CDX85503 | Canola | cytosol | 15.38 | 29.89 |
| CDY38108 | Canola | cytosol | 27.22 | 29.49 |
| AT5G16490.1 | Thale cress | cytosol, extracellular | 26.63 | 29.41 |
| VIT_05s0062g01090.t01 | Wine grape | cytosol, mitochondrion, nucleus | 27.22 | 28.93 |
| KRH00915 | Soybean | mitochondrion | 29.59 | 28.09 |
| KRG92567 | Soybean | cytosol, golgi, plastid | 26.04 | 27.5 |
| TraesCS3B01G459600.1 | Wheat | mitochondrion | 31.95 | 27.0 |
| KRH45224 | Soybean | cytosol, nucleus, plastid | 27.22 | 26.74 |
| KRH40309 | Soybean | mitochondrion | 27.22 | 26.59 |
| PGSC0003DMT400055683 | Potato | plastid | 23.67 | 25.97 |
| KRH01538 | Soybean | cytosol, mitochondrion | 26.04 | 25.43 |
| Solyc11g008880.1.1 | Tomato | mitochondrion | 25.44 | 25.29 |
| PGSC0003DMT400041700 | Potato | mitochondrion | 23.08 | 22.29 |
| GSMUA_Achr10P... | Banana | plastid | 28.99 | 6.87 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G536700.1 | EnsemblPlantsGene:TraesCS5B01G536700 | InterPro:CRIB_dom | InterPro:IPR000095 | PANTHER:PTHR23177 | PANTHER:PTHR23177:SF18 |
| PFAM:PF00786 | PFscan:PS50108 | PFscan:PS51257 | SEG:seg | TIGR:cd00132 | MapMan:27.4.5.2 |
Description
No Description!
Coordinates
chr5B:+:692678719..692679336
Molecular Weight (calculated)
17470.5 Da
IEP (calculated)
4.685
GRAVY (calculated)
-0.253
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEKDRRSGA SFPFSIGCMS QSAVAVADPL DKKPPLPQRL ADNPSSSTNT AAATTQERGA GEESSEEKAK AAAASGIVSA GVQRLLKGIK TFFAAYDGGE
101: EDEEEREIVI GYPTDVQHVG HIGWDGINKV GGMGVGVGMA GAFSLPSSLS LRQLEIAMDP GAAATTCIN
101: EDEEEREIVI GYPTDVQHVG HIGWDGINKV GGMGVGVGMA GAFSLPSSLS LRQLEIAMDP GAAATTCIN
001: MRDRMERLVV LPFSIGCISV SSVAVLSPLS KPHHHHSRQV IREQEEEDNM KNVFKFLAVS KPEISIGINR IFKSFKTISQ LFADKDEEKE EVETSGMEIG
101: VPTNVKHVSH IGWESGLTAA TGPGKGWEDL IPPELLAAAA SKKEINPHLH PTL
101: VPTNVKHVSH IGWESGLTAA TGPGKGWEDL IPPELLAAAA SKKEINPHLH PTL
Arabidopsis Description
RIC4CRIB domain-containing protein RIC4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFD5]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.