Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G093570.4 | Barley | mitochondrion | 79.0 | 81.44 |
| TraesCS3A01G423700.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 81.5 | 81.09 |
| Zm00001d012047_P001 | Maize | mitochondrion | 49.0 | 55.06 |
| Zm00001d042361_P002 | Maize | plastid | 51.0 | 54.26 |
| EES04106 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 54.5 | 53.43 |
| VIT_04s0023g00400.t01 | Wine grape | cytosol | 25.5 | 35.42 |
| VIT_05s0062g01090.t01 | Wine grape | cytosol, mitochondrion, nucleus | 27.5 | 34.59 |
| KRH45224 | Soybean | cytosol, nucleus, plastid | 29.5 | 34.3 |
| KRH01538 | Soybean | cytosol, mitochondrion | 29.5 | 34.1 |
| TraesCS5B01G536700.1 | Wheat | cytosol | 27.0 | 31.95 |
| PGSC0003DMT400055683 | Potato | plastid | 24.5 | 31.82 |
| CDY55580 | Canola | cytosol | 24.0 | 31.58 |
| TraesCS5B01G536800.1 | Wheat | cytosol, plastid | 27.0 | 31.58 |
| CDX69448 | Canola | cytosol | 23.5 | 30.92 |
| Bra008619.1-P | Field mustard | cytosol | 23.5 | 30.72 |
| PGSC0003DMT400011671 | Potato | cytosol | 25.5 | 30.54 |
| AT5G16490.1 | Thale cress | cytosol, extracellular | 22.5 | 29.41 |
| CDY38108 | Canola | cytosol | 22.0 | 28.21 |
| Solyc11g008880.1.1 | Tomato | mitochondrion | 23.5 | 27.65 |
| KRH00915 | Soybean | mitochondrion | 24.5 | 27.53 |
| KRG92567 | Soybean | cytosol, golgi, plastid | 21.5 | 26.88 |
| KRH40309 | Soybean | mitochondrion | 23.0 | 26.59 |
| PGSC0003DMT400041700 | Potato | mitochondrion | 22.5 | 25.71 |
| CDX85503 | Canola | cytosol | 11.0 | 25.29 |
| GSMUA_Achr10P... | Banana | plastid | 29.5 | 8.27 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G459600.1 | EnsemblPlantsGene:TraesCS3B01G459600 | Gene3D:3.90.810.10 | InterPro:CRIB_dom | InterPro:CRIB_dom_sf | InterPro:IPR000095 |
| InterPro:IPR036936 | PANTHER:PTHR23177 | PANTHER:PTHR23177:SF18 | PFAM:PF00786 | PFscan:PS50108 | SEG:seg |
| SMART:SM00285 | TIGR:cd00132 | MapMan:27.4.5.2 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:703116132..703117136
Molecular Weight (calculated)
20455.6 Da
IEP (calculated)
8.525
GRAVY (calculated)
-0.411
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSREQQRGR RDRFIVIPFS ACRSAASVDV VQSKKPQGAG GGGEGTSSSA APGIKPAKGE SLSLVARLLR GFKNLSHQIF AVYDEEDEDE EEPEMVIGLP
101: TDVKHVAHIG WDGSTSTTSS VRSWNRAAPP PGTAAPAAAS ASTSASASTS SAAPPPPQAQ PPALSARQFE LAMAAQASAA ATAASAAGTS GAPRRHHHYS
101: TDVKHVAHIG WDGSTSTTSS VRSWNRAAPP PGTAAPAAAS ASTSASASTS SAAPPPPQAQ PPALSARQFE LAMAAQASAA ATAASAAGTS GAPRRHHHYS
001: MTSPMKGLLK GLRYIARIFE DEKEPEMQIG IPTDVKHVAH IGWEGPSATT PSWMHDFKPT DQTKTETKGT SNKKPGSSGE KHRKGRRKTS TGNNSPTESP
101: SRVGGSVRPS KRNTGKQREQ NTGSGSESGS GLELPQQTDQ FVVPKQSKQK KSKGSATGGG EPPPSNEPSN KKETDISVRA VYPCAGLGSS TGR
101: SRVGGSVRPS KRNTGKQREQ NTGSGSESGS GLELPQQTDQ FVVPKQSKQK KSKGSATGGG EPPPSNEPSN KKETDISVRA VYPCAGLGSS TGR
Arabidopsis Description
RIC5CRIB domain-containing protein RIC5 [Source:UniProtKB/Swiss-Prot;Acc:F4J424]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.