Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042361_P002 | Maize | plastid | 69.1 | 65.43 |
| TraesCS3B01G459600.1 | Wheat | mitochondrion | 55.06 | 49.0 |
| HORVU3Hr1G093570.4 | Barley | mitochondrion | 53.37 | 48.97 |
| TraesCS3A01G423700.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 55.06 | 48.76 |
| VIT_04s0023g00400.t01 | Wine grape | cytosol | 26.97 | 33.33 |
| PGSC0003DMT400055683 | Potato | plastid | 28.09 | 32.47 |
| PGSC0003DMT400011671 | Potato | cytosol | 30.34 | 32.34 |
| VIT_05s0062g01090.t01 | Wine grape | cytosol, mitochondrion, nucleus | 28.65 | 32.08 |
| CDY55580 | Canola | cytosol | 26.97 | 31.58 |
| CDX69448 | Canola | cytosol | 26.4 | 30.92 |
| KRH45224 | Soybean | cytosol, nucleus, plastid | 29.78 | 30.81 |
| Bra008619.1-P | Field mustard | cytosol | 26.4 | 30.72 |
| KRH01538 | Soybean | cytosol, mitochondrion | 29.78 | 30.64 |
| Zm00001d034836_P001 | Maize | cytosol, nucleus, peroxisome | 31.46 | 29.32 |
| AT5G16490.1 | Thale cress | cytosol, extracellular | 24.16 | 28.1 |
| Solyc11g008880.1.1 | Tomato | mitochondrion | 25.84 | 27.06 |
| KRH00915 | Soybean | mitochondrion | 26.97 | 26.97 |
| KRH40309 | Soybean | mitochondrion | 25.28 | 26.01 |
| PGSC0003DMT400041700 | Potato | mitochondrion | 24.72 | 25.14 |
| KRG92567 | Soybean | cytosol, golgi, plastid | 21.91 | 24.38 |
| CDY38108 | Canola | cytosol | 21.35 | 24.36 |
| CDX85503 | Canola | cytosol | 11.8 | 24.14 |
| GSMUA_Achr10P... | Banana | plastid | 30.9 | 7.71 |
Protein Annotations
| EnsemblPlants:Zm00001d012047_P001 | EnsemblPlants:Zm00001d012047_T001 | EnsemblPlantsGene:Zm00001d012047 | Gene3D:3.90.810.10 | InterPro:CRIB_dom | InterPro:CRIB_dom_sf |
| InterPro:IPR000095 | InterPro:IPR036936 | PANTHER:PTHR23177 | PANTHER:PTHR23177:SF53 | PFAM:PF00786 | PFscan:PS50108 |
| ProteinID:AQK98699.1 | SEG:seg | SMART:SM00285 | UniParc:UPI0002220F7B | UniProt:K7VMA7 | MapMan:27.4.5.2 |
Description
Wiscott-Aldrich syndrome
Coordinates
chr8:+:167201109..167202412
Molecular Weight (calculated)
19131.5 Da
IEP (calculated)
9.781
GRAVY (calculated)
-0.564
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MSREQQMPRR RFIAIPFSSG CRSHSSVDVV DTGRLAGDGK KPHPQGAEAG AAAAAARGKG ESLVARLLRG FKNLSQIFAV YDEEEEEERE MVIGLPTDVK
101: HVAHIGWDGA TSTSSNLRSW NRPAPPPPAS SFSAPQQRPQ EQYPLPLPAL SMRQLELAMG AQAQAAGGAT TAAHRRHS
101: HVAHIGWDGA TSTSSNLRSW NRPAPPPPAS SFSAPQQRPQ EQYPLPLPAL SMRQLELAMG AQAQAAGGAT TAAHRRHS
001: MQLGMSSTKM KSLLKGLRYI SQVFAIEGEK EEEMQIGNPT DVKHVAHIGW DGPSDNATAP SWMNDFKSSP VMESIQGLGE DDSSVKCQSE FGGRTRDLPK
101: LPKSTRKSSS EKGSPTKERS DKTKRRTSNK GTSSSRRTKD EDSTSSSRRT TKDEDSSLSQ HSAGLPEVPK KSKRKKSKEA GNGGSSRSSR ISEADYMSDT
201: GSDRSMPQFE DDRNGF
101: LPKSTRKSSS EKGSPTKERS DKTKRRTSNK GTSSSRRTKD EDSTSSSRRT TKDEDSSLSQ HSAGLPEVPK KSKRKKSKEA GNGGSSRSSR ISEADYMSDT
201: GSDRSMPQFE DDRNGF
Arabidopsis Description
RIC7CRIB domain-containing protein RIC7 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3K8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.