Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G337000.1 | Wheat | cytosol, plastid | 70.18 | 76.43 |
| TraesCS5B01G536700.1 | Wheat | cytosol | 73.1 | 73.96 |
| Os03t0847900-01 | Rice | cytosol, peroxisome, plastid | 52.63 | 54.22 |
| HORVU5Hr1G121080.2 | Barley | endoplasmic reticulum, golgi | 71.34 | 52.59 |
| OQU90622 | Sorghum | cytosol | 49.71 | 47.49 |
| Zm00001d034836_P001 | Maize | cytosol, nucleus, peroxisome | 45.03 | 40.31 |
| VIT_05s0062g01090.t01 | Wine grape | cytosol, mitochondrion, nucleus | 29.24 | 31.45 |
| PGSC0003DMT400011671 | Potato | cytosol | 29.82 | 30.54 |
| CDX69448 | Canola | cytosol | 26.9 | 30.26 |
| CDY38108 | Canola | cytosol | 27.49 | 30.13 |
| Bra008619.1-P | Field mustard | cytosol | 26.9 | 30.07 |
| CDX85503 | Canola | cytosol | 15.2 | 29.89 |
| VIT_04s0023g00400.t01 | Wine grape | cytosol | 25.15 | 29.86 |
| CDY55580 | Canola | cytosol | 26.32 | 29.61 |
| AT5G16490.1 | Thale cress | cytosol, extracellular | 24.56 | 27.45 |
| TraesCS3B01G459600.1 | Wheat | mitochondrion | 31.58 | 27.0 |
| KRH00915 | Soybean | mitochondrion | 28.07 | 26.97 |
| KRG92567 | Soybean | cytosol, golgi, plastid | 25.15 | 26.88 |
| KRH40309 | Soybean | mitochondrion | 26.9 | 26.59 |
| KRH45224 | Soybean | cytosol, nucleus, plastid | 26.32 | 26.16 |
| KRH01538 | Soybean | cytosol, mitochondrion | 26.32 | 26.01 |
| PGSC0003DMT400055683 | Potato | plastid | 23.39 | 25.97 |
| Solyc11g008880.1.1 | Tomato | mitochondrion | 23.98 | 24.12 |
| PGSC0003DMT400041700 | Potato | mitochondrion | 23.98 | 23.43 |
| GSMUA_Achr10P... | Banana | plastid | 28.07 | 6.73 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G536800.1 | EnsemblPlantsGene:TraesCS5B01G536800 | InterPro:CRIB_dom | InterPro:IPR000095 | PANTHER:PTHR23177 | PANTHER:PTHR23177:SF18 |
| PFAM:PF00786 | PFscan:PS50108 | PFscan:PS51257 | SEG:seg | TIGR:cd00132 | MapMan:27.4.5.2 |
Description
No Description!
Coordinates
chr5B:+:692691202..692691791
Molecular Weight (calculated)
17512.4 Da
IEP (calculated)
4.357
GRAVY (calculated)
-0.280
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDRRGGAGF PFSIGCMSQS AVAVADPLGK KPPAPAPQPQ ADNPSSSTTT TATAQERGAG EESSEDKART AAAAAAGTVT AGVQRLLRGI KTFFAAYDVD
101: EEEDEEEQEI VIGYPTDVQH VGHIGWDGIN KVGGMGVGVG MAGAFSLPSS LSLRQLETAM DPGAATTTCI N
101: EEEDEEEQEI VIGYPTDVQH VGHIGWDGIN KVGGMGVGVG MAGAFSLPSS LSLRQLETAM DPGAATTTCI N
001: MKDRMERLLI LPFSLGCSTQ SCVAVATTHQ QKKPNQLIKR REESHENGSF EKEYTKMDRN GANMLDGRVE SDAKGSFRKD YTKMENNNNG ANISDGIYRI
101: IRSFKSFSHF FIRYEEETKE REAEMEIGFP TDVKHLSHIG VDGTMTTFDN TSSSFPFSGF HLTGTVV
101: IRSFKSFSHF FIRYEEETKE REAEMEIGFP TDVKHLSHIG VDGTMTTFDN TSSSFPFSGF HLTGTVV
Arabidopsis Description
RIC2RIC2 [Source:UniProtKB/TrEMBL;Acc:A0A178WAB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.