Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G337200.1 | Wheat | cytosol | 72.25 | 72.25 |
| TraesCS5D01G534200.1 | Wheat | cytosol | 69.36 | 71.01 |
| TraesCS5B01G536700.1 | Wheat | cytosol | 69.36 | 71.01 |
| Os03t0847900-01 | Rice | cytosol, peroxisome, plastid | 51.45 | 53.61 |
| HORVU5Hr1G121080.2 | Barley | endoplasmic reticulum, golgi | 65.32 | 48.71 |
| OQU90622 | Sorghum | cytosol | 45.09 | 43.58 |
| Zm00001d034836_P001 | Maize | cytosol, nucleus, peroxisome | 46.24 | 41.88 |
| VIT_04s0023g00400.t01 | Wine grape | cytosol | 25.43 | 30.56 |
| CDX85503 | Canola | cytosol | 15.03 | 29.89 |
| CDY55580 | Canola | cytosol | 26.01 | 29.61 |
| CDY38108 | Canola | cytosol | 26.59 | 29.49 |
| AT5G16490.1 | Thale cress | cytosol, extracellular | 26.01 | 29.41 |
| KRH45224 | Soybean | cytosol, nucleus, plastid | 28.9 | 29.07 |
| CDX69448 | Canola | cytosol | 25.43 | 28.95 |
| KRH01538 | Soybean | cytosol, mitochondrion | 28.9 | 28.9 |
| Bra008619.1-P | Field mustard | cytosol | 25.43 | 28.76 |
| PGSC0003DMT400011671 | Potato | cytosol | 27.17 | 28.14 |
| VIT_05s0062g01090.t01 | Wine grape | cytosol, mitochondrion, nucleus | 24.86 | 27.04 |
| KRH00915 | Soybean | mitochondrion | 26.59 | 25.84 |
| KRG92567 | Soybean | cytosol, golgi, plastid | 23.7 | 25.62 |
| KRH40309 | Soybean | mitochondrion | 24.86 | 24.86 |
| PGSC0003DMT400055683 | Potato | plastid | 21.39 | 24.03 |
| Solyc11g008880.1.1 | Tomato | mitochondrion | 21.39 | 21.76 |
| PGSC0003DMT400041700 | Potato | mitochondrion | 21.97 | 21.71 |
| GSMUA_Achr10P... | Banana | plastid | 28.32 | 6.87 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G534300.1 | EnsemblPlantsGene:TraesCS5D01G534300 | InterPro:CRIB_dom | InterPro:IPR000095 | PANTHER:PTHR23177 | PANTHER:PTHR23177:SF18 |
| PFAM:PF00786 | PFscan:PS50108 | PFscan:PS51257 | SEG:seg | TIGR:cd00132 | MapMan:27.4.5.2 |
Description
No Description!
Coordinates
chr5D:+:548479594..548480350
Molecular Weight (calculated)
17905.9 Da
IEP (calculated)
4.333
GRAVY (calculated)
-0.320
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDRRSGAGF SFSIGCMSQS AVAVAEPLDK KPPAPAPQPQ QEADTPSSST TTTAATAQER GAGEESSEDK ARTAAAASGV VTAGVQRLLK GIKTFFAAYD
101: GEEDEEEEDR EIVIGYPTDV QHVGHIGWDG LNKVGGMGVG MGMVGAFSQP SSLSLRQLEI AMDPGAVATT CIN
101: GEEDEEEEDR EIVIGYPTDV QHVGHIGWDG LNKVGGMGVG MGMVGAFSQP SSLSLRQLEI AMDPGAVATT CIN
001: MRDRMERLVV LPFSIGCISV SSVAVLSPLS KPHHHHSRQV IREQEEEDNM KNVFKFLAVS KPEISIGINR IFKSFKTISQ LFADKDEEKE EVETSGMEIG
101: VPTNVKHVSH IGWESGLTAA TGPGKGWEDL IPPELLAAAA SKKEINPHLH PTL
101: VPTNVKHVSH IGWESGLTAA TGPGKGWEDL IPPELLAAAA SKKEINPHLH PTL
Arabidopsis Description
RIC4CRIB domain-containing protein RIC4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFD5]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.