Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G384900.1 | Wheat | nucleus | 89.2 | 94.89 |
| TraesCS5B01G377400.1 | Wheat | nucleus | 89.6 | 93.72 |
| KXG24984 | Sorghum | nucleus | 71.6 | 82.49 |
| Zm00001d032361_P001 | Maize | nucleus | 68.8 | 82.3 |
| Os03t0641700-02 | Rice | nucleus | 71.2 | 80.91 |
| TraesCS5A01G038000.1 | Wheat | nucleus | 59.2 | 72.91 |
| TraesCS7A01G546500.1 | Wheat | nucleus | 58.8 | 72.41 |
| TraesCS5A01G090300.1 | Wheat | nucleus | 54.0 | 68.88 |
| Solyc09g020010.1.1 | Tomato | nucleus | 53.2 | 68.21 |
| GSMUA_Achr1P04140_001 | Banana | nucleus | 56.0 | 67.31 |
| Solyc06g007660.1.1 | Tomato | nucleus | 53.2 | 64.56 |
| PGSC0003DMT400053217 | Potato | nucleus | 53.2 | 64.56 |
| GSMUA_Achr4P31560_001 | Banana | nucleus | 58.4 | 64.32 |
| KRH06516 | Soybean | nucleus | 56.0 | 63.06 |
| GSMUA_Achr9P19370_001 | Banana | nucleus | 54.4 | 62.39 |
| KRH47954 | Soybean | nucleus | 54.8 | 61.44 |
| CDY14004 | Canola | nucleus | 49.2 | 60.29 |
| CDX78474 | Canola | nucleus | 53.2 | 60.18 |
| Solyc06g082900.2.1 | Tomato | nucleus | 52.8 | 60.0 |
| Bra006148.1-P | Field mustard | nucleus | 52.8 | 59.73 |
| PGSC0003DMT400071143 | Potato | nucleus | 52.4 | 59.55 |
| CDX92526 | Canola | nucleus | 48.4 | 59.31 |
| PGSC0003DMT400074614 | Potato | nucleus | 36.8 | 58.97 |
| CDX70456 | Canola | nucleus | 52.0 | 58.82 |
| CDX97177 | Canola | nucleus | 50.8 | 58.53 |
| Bra002239.1-P | Field mustard | nucleus | 49.6 | 58.49 |
| KRH51345 | Soybean | nucleus | 50.0 | 58.41 |
| AT5G12230.1 | Thale cress | nucleus | 51.6 | 58.37 |
| Bra008906.1-P | Field mustard | nucleus | 51.2 | 58.18 |
| AT5G19480.3 | Thale cress | nucleus | 48.0 | 57.97 |
| CDX69696 | Canola | nucleus | 50.8 | 57.73 |
| VIT_00s0174g00320.t01 | Wine grape | nucleus | 34.0 | 55.19 |
| KRH60658 | Soybean | nucleus | 50.4 | 53.62 |
| GSMUA_Achr7P07140_001 | Banana | nucleus | 55.2 | 48.25 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G375300.1 | EnsemblPlantsGene:TraesCS5A01G375300 | ncoils:Coil | PANTHER:PTHR22536 | PANTHER:PTHR22536:SF2 | SEG:seg |
| MapMan:15.3.3.1.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:573100442..573102443
Molecular Weight (calculated)
29156.0 Da
IEP (calculated)
10.443
GRAVY (calculated)
-1.451
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MCICFLKSNL RWTCILQMSG SNQMASDGKF GKGPRELTGA VDLISRYRLL NHHSFFCKKP LPLAISDTHY LQNVVGDTEI RKGEGMEIDQ LIQNPDLREK
101: KTAYIQPFDM ETLGHAFQLR ETAPVDLPSA EKGTPTISGK SKVKSRDKVK KHKKHKEKDK DKEHKKHKHR HKDRSKDKDK DKEKEKEKEK EKEKEKDKDK
201: DKEKKKEKSV HHDLGGDNSK KHHEKKRKHD GMENLAAVRN HKKTQKRKIQ
101: KTAYIQPFDM ETLGHAFQLR ETAPVDLPSA EKGTPTISGK SKVKSRDKVK KHKKHKEKDK DKEHKKHKHR HKDRSKDKDK DKEKEKEKEK EKEKEKDKDK
201: DKEKKKEKSV HHDLGGDNSK KHHEKKRKHD GMENLAAVRN HKKTQKRKIQ
001: MEPERLKFGG PRELCGAADL ISQFKLVQHH EFFCKKSLPV SLSDSHYLHN VVGDTEIRKG EGMQLDQLIE SISQSRETNI RIQPFDIDEL QESFQLNDMT
101: PVELPPAEKG APTIPSKSKS ESKDRDRKHK KHKDRDKDKD REHKKHKHKH KDRSKDKDKD KDRDRKKDKN GHHDSGDHSK KHHDKKRKHD GDEDLNDVQR
201: HKKNKHKSSK LDEVGAIRVA G
101: PVELPPAEKG APTIPSKSKS ESKDRDRKHK KHKDRDKDKD REHKKHKHKH KDRSKDKDKD KDRDRKKDKN GHHDSGDHSK KHHDKKRKHD GDEDLNDVQR
201: HKKNKHKSSK LDEVGAIRVA G
Arabidopsis Description
MED19AMediator of RNA polymerase II transcription subunit 19a [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.