Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- endoplasmic reticulum 1
- mitochondrion 1
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P04140_001 | Banana | nucleus | 60.14 | 82.69 |
| GSMUA_Achr9P19370_001 | Banana | nucleus | 59.79 | 78.44 |
| Os12t0614000-01 | Rice | nucleus | 55.94 | 72.73 |
| KXG23999 | Sorghum | nucleus | 54.2 | 71.43 |
| GSMUA_Achr4P31560_001 | Banana | nucleus | 56.64 | 71.37 |
| TraesCS7D01G532700.1 | Wheat | nucleus | 49.65 | 69.95 |
| TraesCS7B01G469600.1 | Wheat | nucleus | 49.65 | 69.95 |
| TraesCS7A01G546500.1 | Wheat | nucleus | 49.65 | 69.95 |
| TraesCS5A01G038000.1 | Wheat | nucleus | 49.65 | 69.95 |
| TraesCS5D01G045400.1 | Wheat | nucleus | 48.95 | 68.97 |
| TraesCS5B01G039500.1 | Wheat | nucleus | 48.95 | 68.97 |
| PGSC0003DMT400053217 | Potato | nucleus | 49.65 | 68.93 |
| HORVU5Hr1G009530.1 | Barley | nucleus | 51.05 | 68.54 |
| Solyc06g007660.1.1 | Tomato | nucleus | 49.3 | 68.45 |
| Solyc09g020010.1.1 | Tomato | nucleus | 46.5 | 68.21 |
| TraesCS5A01G090300.1 | Wheat | nucleus | 45.1 | 65.82 |
| KRH47954 | Soybean | nucleus | 50.35 | 64.57 |
| KXG24984 | Sorghum | nucleus | 48.95 | 64.52 |
| Zm00001d032361_P001 | Maize | nucleus | 46.85 | 64.11 |
| KRH06516 | Soybean | nucleus | 49.65 | 63.96 |
| Os03t0641700-02 | Rice | nucleus | 48.95 | 63.64 |
| VIT_00s0174g00320.t01 | Wine grape | nucleus | 33.92 | 62.99 |
| PGSC0003DMT400074614 | Potato | nucleus | 34.27 | 62.82 |
| PGSC0003DMT400071143 | Potato | nucleus | 47.9 | 62.27 |
| Solyc06g082900.2.1 | Tomato | nucleus | 47.9 | 62.27 |
| KRH51345 | Soybean | nucleus | 44.41 | 59.35 |
| AT5G19480.3 | Thale cress | nucleus | 42.66 | 58.94 |
| CDY14004 | Canola | nucleus | 41.96 | 58.82 |
| CDX78474 | Canola | nucleus | 44.76 | 57.92 |
| Bra006148.1-P | Field mustard | nucleus | 44.76 | 57.92 |
| CDX70456 | Canola | nucleus | 44.76 | 57.92 |
| AT5G12230.1 | Thale cress | nucleus | 44.76 | 57.92 |
| CDX69696 | Canola | nucleus | 44.41 | 57.73 |
| CDX97177 | Canola | nucleus | 43.71 | 57.6 |
| Bra008906.1-P | Field mustard | nucleus | 44.06 | 57.27 |
| CDX92526 | Canola | nucleus | 40.56 | 56.86 |
| TraesCS5D01G384900.1 | Wheat | nucleus | 46.5 | 56.6 |
| TraesCS5B01G377400.1 | Wheat | nucleus | 47.2 | 56.49 |
| KRH60658 | Soybean | nucleus | 46.15 | 56.17 |
| TraesCS5A01G375300.1 | Wheat | mitochondrion | 48.25 | 55.2 |
| Bra002239.1-P | Field mustard | nucleus | 40.91 | 55.19 |
| Zm00001d031065_P001 | Maize | cytosol | 48.95 | 53.23 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P07140_001 | EnsemblPlants:GSMUA_Achr7T07140_001 | EnsemblPlantsGene:GSMUA_Achr7G07140_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR22536 | PANTHER:PTHR22536:SF2 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002960718 | UniProt:M0TFF4 |
| MapMan:15.3.3.1.6 | : | : | : | : | : |
Description
nucleolar protein NOP5, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G07140_001]
Coordinates
chr7:-:5226715..5229931
Molecular Weight (calculated)
33350.9 Da
IEP (calculated)
10.152
GRAVY (calculated)
-0.899
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSDDRMYSK GKFGRGPREL TGAVDLIKHY KLSALHDFFC KRTLPSSISD THYLHNVVGE TEIRKGEGME LGQLFQSAPY LRETTSQIQQ FDLEILGQAF
101: QLRDTAPIDL PSSEKGIPTI SGKSIGDSKG KERKHRKHKD KDREKDKEHK KHKHRHKDRT KDKDKEKKKD KSGRHDSGGD HSTKHHEKKR KHDGNEDSVD
201: NHKHKKTKVV GVLVFSASLL LYDYICWFHL TKAILTSEIF QHKMSYCQTC WWRRIVRRIS FHAPEFFELA IIHLFTLMVP LSYNFS
101: QLRDTAPIDL PSSEKGIPTI SGKSIGDSKG KERKHRKHKD KDREKDKEHK KHKHRHKDRT KDKDKEKKKD KSGRHDSGGD HSTKHHEKKR KHDGNEDSVD
201: NHKHKKTKVV GVLVFSASLL LYDYICWFHL TKAILTSEIF QHKMSYCQTC WWRRIVRRIS FHAPEFFELA IIHLFTLMVP LSYNFS
001: MEPERLKFGG PRELCGAADL ISQFKLVQHH EFFCKKSLPV SLSDSHYLHN VVGDTEIRKG EGMQLDQLIE SISQSRETNI RIQPFDIDEL QESFQLNDMT
101: PVELPPAEKG APTIPSKSKS ESKDRDRKHK KHKDRDKDKD REHKKHKHKH KDRSKDKDKD KDRDRKKDKN GHHDSGDHSK KHHDKKRKHD GDEDLNDVQR
201: HKKNKHKSSK LDEVGAIRVA G
101: PVELPPAEKG APTIPSKSKS ESKDRDRKHK KHKDRDKDKD REHKKHKHKH KDRSKDKDKD KDRDRKKDKN GHHDSGDHSK KHHDKKRKHD GDEDLNDVQR
201: HKKNKHKSSK LDEVGAIRVA G
Arabidopsis Description
MED19AMediator of RNA polymerase II transcription subunit 19a [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.