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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G045730.3 Barley nucleus 74.32 71.15
TraesCS7B01G451300.1 Wheat nucleus 76.71 60.87
TraesCS7A01G534200.1 Wheat nucleus 81.51 57.77
TraesCS5D01G058500.1 Wheat nucleus 56.16 39.42
OQU91410 Sorghum nucleus 53.08 33.77
Solyc08g076440.2.1 Tomato nucleus 35.27 29.86
TraesCS4D01G189400.1 Wheat nucleus 41.44 28.88
TraesCS2D01G317600.1 Wheat nucleus 41.44 28.88
KRH37677 Soybean nucleus 39.73 28.57
KRH24906 Soybean nucleus 39.04 28.43
Bra036286.1-P Field mustard nucleus 39.04 27.47
CDY22038 Canola nucleus 39.04 27.47
CDY52785 Canola nucleus 38.7 27.1
VIT_07s0005g00910.t01 Wine grape nucleus 37.33 26.14
AT4G02220.1 Thale cress nucleus 36.99 25.84
PGSC0003DMT400038341 Potato nucleus 36.99 25.47
GSMUA_Achr6P05130_001 Banana mitochondrion, nucleus 39.73 22.01
Os01t0578200-00 Rice cytosol, nucleus 6.51 11.88
KRG89015 Soybean nucleus 2.4 7.0
Protein Annotations
EnsemblPlants:TraesCS7D01G521500.1EnsemblPlantsGene:TraesCS7D01G521500Gene3D:3.30.60.180InterPro:IPR002893InterPro:Znf_MYNDPANTHER:PTHR12298
PANTHER:PTHR12298:SF26PFAM:PF01753PFscan:PS50865SEG:segSUPFAM:SSF144232MapMan:35.2
Description
No Description!
Coordinates
chr7D:-:618710823..618712453
Molecular Weight (calculated)
32922.7 Da
IEP (calculated)
4.727
GRAVY (calculated)
-0.464
Length
292 amino acids
Sequence
(BLAST)
001: MGDGTKAGAE PDDAIFERDY LDDDNEEELE PEVTLGVLWK PKEPWDFHSL LPQHFPSKAG GAPAWLDPVN LPSGKSSCCD FCGDPLRFVM QVYVPDGWKE
101: TTFHRAFFVF MCPSMSCLQL DQREQGKDKA ANPRRSVKVF RCQLPRINAF YTPEEPKGCV GSQCSGAHRS RLCDWCGTWK GEILCSHCSK ASYCSRKHQE
201: LHWHASHEND CSQIPGSPDA SILPVAAKVF PGHAWPEYAV DHEPEPSCST SSIKDNSELM MVEGEVESDA MMQLFMDQFE VFFVLWPMLP YS
Best Arabidopsis Sequence Match ( AT4G02220.1 )
(BLAST)
001: MSSFNGDSMD DFKGLRITQL DDDDDDETAV EPINMDEFDD DDEEDDEDYE PVMLGFVESP KFAWSNLRQL FPNLAGGVPA WLDPVNLPSG KSILCDLCEE
101: PMQFVLQLYA PLTDKESAFH RTLFLFMCPS MSCLLRDQHE QWKRAPEKAM RSTKVFRCQL PRANPFYSSE APKHDGTDKP LGHGAPLCTW CGTWKGDKLC
201: SGCKNARYCS PKHQALHWRL GHKTECQQLR TVSETSDSGP VNNGVAPTEK QKVASKSLWK EFVLINEDES EYDTEMSGDD EVAKPLVSKR EVDDQMKSLM
301: NDFEGDADKK NWVNFQQRVD KAPEQVLRYS RSSGAKPLWP IASGRVSKSE LPSCKSCGGP RCFEFQVMPQ LLFFFGGKNE RESLDWATIV VYTCENSCDS
401: SLSYKEEFVW VQLYSQTT
Arabidopsis Description
Putative zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q93VB4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.