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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G376600.1 Wheat nucleus 99.64 99.64
TraesCS3A01G366100.1 Wheat golgi 98.2 98.2
HORVU3Hr1G086050.1 Barley cytosol 96.76 96.76
TraesCS5D01G470000.1 Wheat extracellular, golgi, plastid, unclear 94.6 94.27
Os03t0807800-01 Rice nucleus 89.57 90.88
GSMUA_Achr1P22950_001 Banana cytosol, endoplasmic reticulum, nucleus 74.1 81.1
KRH60418 Soybean mitochondrion, nucleus 79.14 80.88
VIT_08s0007g08370.t01 Wine grape cytosol, endoplasmic reticulum, nucleus 79.14 80.59
KRH41719 Soybean nucleus 40.29 80.58
KRH27864 Soybean nucleus 79.5 80.36
KRH27874 Soybean nucleus 79.5 80.36
KRH70352 Soybean endoplasmic reticulum, nucleus 79.5 80.36
AT3G57490.1 Thale cress cytosol 77.7 78.26
GSMUA_AchrUn_... Banana cytosol 60.79 77.88
Solyc04g063290.2.1 Tomato nucleus 78.42 77.86
PGSC0003DMT400063904 Potato cytosol 78.06 77.5
GSMUA_Achr2P07800_001 Banana cytosol 61.51 77.38
GSMUA_Achr1P12890_001 Banana cytosol 60.79 77.17
Solyc04g074300.2.1 Tomato nucleus 77.7 77.14
Bra035439.1-P Field mustard cytosol 77.34 76.79
AT2G41840.1 Thale cress cytosol 78.42 76.49
PGSC0003DMT400079142 Potato cytosol 71.22 76.45
Bra016913.1-P Field mustard cytosol 77.7 75.79
Bra004654.1-P Field mustard cytosol 77.7 75.79
Bra000242.1-P Field mustard cytosol 76.62 75.53
AT1G58983.1 Thale cress cytosol 76.26 74.65
AT1G58684.1 Thale cress cytosol 76.26 74.65
AT1G59359.1 Thale cress cytosol 76.26 74.65
AT1G58380.1 Thale cress cytosol 75.18 73.59
GSMUA_Achr8P31470_001 Banana cytosol 34.17 61.69
PGSC0003DMT400013052 Potato cytosol 22.66 58.33
Bra027857.1-P Field mustard cytosol, mitochondrion, nucleus 8.27 35.94
Protein Annotations
MapMan:17.1.3.1.2Gene3D:3.30.160.770Gene3D:3.30.230.10GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0003735GO:GO:0005198GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005840GO:GO:0006412GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0015935GO:GO:0019538InterPro:IPR013810InterPro:IPR014721PFAM:PF00333
PFAM:PF03719ScanProsite:PS00585PFscan:PS50881PANTHER:PTHR13718PANTHER:PTHR13718:SF74InterPro:Ribosomal_S5
InterPro:Ribosomal_S5_CInterPro:Ribosomal_S5_D2-typ_foldInterPro:Ribosomal_S5_D2-typ_fold_subgrInterPro:Ribosomal_S5_NInterPro:Ribosomal_S5_N_CSInterPro:Ribosomal_S5_euk/arc
SUPFAM:SSF54211SUPFAM:SSF54768TIGRFAMs:TIGR01020EnsemblPlantsGene:TraesCS3D01G338200EnsemblPlants:TraesCS3D01G338200.1SEG:seg
Description
No Description!
Coordinates
chr3D:+:451226511..451228553
Molecular Weight (calculated)
30385.2 Da
IEP (calculated)
10.873
GRAVY (calculated)
-0.375
Length
278 amino acids
Sequence
(BLAST)
001: MADRGGERGG DRGGERGGFG RGFGRGGRGD RGGRRGGRRG PRQEEEKWVP VTKLGRLVKE GRFTKMEELY LHSLPIKEHQ IVEQLCPGLK DEVMKITPVQ
101: KQTRAGQRTR FKAFVVVGDS NGHVGLGVKC AKEVATAIRG AIILAKLSIV PVRRGYWGNK IGLPHTVPCK VTGKCGSVTV RMVPAPRGSG IVAARVPKKV
201: LQFAGIDDVF TSSRGSTKTL GNFVKATFDC LMKTYGFLTP DFWRETTFTK APYQEFTDIL VKPTKALMLD APAEKIEA
Best Arabidopsis Sequence Match ( AT3G57490.1 )
(BLAST)
001: MAERGVERGG DRGDFGRGFG GRGGGRGGPR GRGRRAGRAP EEEKWVPVTK LGRLVKEGKI TKIEQIYLHS LPVKEYQIID LLVGPSLKDE VMKIMPVQKQ
101: TRAGQRTRFK AFIVVGDSNG HVGLGVKCSK EVATAIRGAI ILAKLSVVPI RRGYWGNKIG KPHTVPCKVT GKCGSVTVRM VPAPRGSGIV AARVPKKVLQ
201: FAGIDDVFTS SRGSTKTLGN FVKATFDCLQ KTYGFLTPEF WKETRFSKSP YQEHTDFLLI PPGVKISEVV VDKSVE
Arabidopsis Description
RPS2D40S ribosomal protein S2-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCM3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.