Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G58983.1 | Thale cress | cytosol | 94.01 | 94.01 |
| AT1G59359.1 | Thale cress | cytosol | 94.01 | 94.01 |
| AT1G58684.1 | Thale cress | cytosol | 94.01 | 94.01 |
| CDY45881 | Canola | cytosol | 85.92 | 88.41 |
| Bra035439.1-P | Field mustard | cytosol | 85.56 | 86.79 |
| CDY44553 | Canola | cytosol | 85.56 | 86.79 |
| AT3G57490.1 | Thale cress | cytosol | 83.45 | 85.87 |
| KRH70352 | Soybean | endoplasmic reticulum, nucleus | 83.1 | 85.82 |
| KRH60418 | Soybean | mitochondrion, nucleus | 82.04 | 85.66 |
| KRH27864 | Soybean | nucleus | 82.75 | 85.45 |
| KRH27874 | Soybean | nucleus | 82.39 | 85.09 |
| AT2G41840.1 | Thale cress | cytosol | 84.86 | 84.56 |
| CDY42063 | Canola | mitochondrion | 28.87 | 84.54 |
| Os07t0207400-01 | Rice | cytosol, golgi, nucleus, plasma membrane | 48.59 | 83.64 |
| KRH41719 | Soybean | nucleus | 39.79 | 81.3 |
| GSMUA_Achr1P22950_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 72.18 | 80.71 |
| PGSC0003DMT400063904 | Potato | cytosol | 79.23 | 80.36 |
| VIT_08s0007g08370.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 77.11 | 80.22 |
| Solyc04g074300.2.1 | Tomato | nucleus | 78.87 | 80.0 |
| Solyc04g063290.2.1 | Tomato | nucleus | 78.87 | 80.0 |
| Zm00001d013034_P001 | Maize | plastid | 76.76 | 79.56 |
| EER93243 | Sorghum | cytosol | 76.41 | 79.2 |
| Zm00001d034550_P001 | Maize | plasma membrane, plastid | 76.41 | 79.2 |
| EER93242 | Sorghum | cytosol | 76.41 | 79.2 |
| PGSC0003DMT400079142 | Potato | cytosol | 71.48 | 78.38 |
| TraesCS5B01G468500.1 | Wheat | plastid | 75.35 | 78.1 |
| Os03t0807800-01 | Rice | nucleus | 75.35 | 78.1 |
| TraesCS5A01G458900.1 | Wheat | cytosol | 75.0 | 77.45 |
| TraesCS5D01G470000.1 | Wheat | extracellular, golgi, plastid, unclear | 75.7 | 77.06 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.8 | 76.96 |
| GSMUA_Achr2P07800_001 | Banana | cytosol | 59.86 | 76.92 |
| GSMUA_Achr1P12890_001 | Banana | cytosol | 59.15 | 76.71 |
| Zm00001d019147_P001 | Maize | plasma membrane, plastid | 75.35 | 76.7 |
| EER96052 | Sorghum | cytosol | 75.0 | 76.34 |
| TraesCS3A01G366100.1 | Wheat | golgi | 74.3 | 75.9 |
| HORVU3Hr1G086050.1 | Barley | cytosol | 73.94 | 75.54 |
| TraesCS3B01G376600.1 | Wheat | nucleus | 73.59 | 75.18 |
| TraesCS3D01G338200.1 | Wheat | cytosol | 73.59 | 75.18 |
| CDY65554 | Canola | cytosol | 13.03 | 68.52 |
| HORVU5Hr1G109910.2 | Barley | cytosol | 67.61 | 63.37 |
| GSMUA_Achr8P31470_001 | Banana | cytosol | 31.69 | 58.44 |
| OQU76471 | Sorghum | cytosol | 44.01 | 57.08 |
| PGSC0003DMT400013052 | Potato | cytosol | 20.42 | 53.7 |
| Bra027857.1-P | Field mustard | cytosol, mitochondrion, nucleus | 11.97 | 53.12 |
| OQU90562 | Sorghum | cytosol, plastid | 28.87 | 42.49 |
Protein Annotations
| MapMan:17.1.3.1.2 | Gene3D:3.30.160.770 | Gene3D:3.30.230.10 | EntrezGene:842207 | ProteinID:AAF82250.1 | ProteinID:AAG50639.1 |
| EMBL:AB008016 | ProteinID:AEE33543.1 | ProteinID:AEM36354.1 | EMBL:AF386958 | ArrayExpress:AT1G58380 | EnsemblPlantsGene:AT1G58380 |
| RefSeq:AT1G58380 | TAIR:AT1G58380 | RefSeq:AT1G58380-TAIR-G | EnsemblPlants:AT1G58380.1 | TAIR:AT1G58380.1 | EMBL:AY072528 |
| EMBL:AY088743 | ProteinID:BAB83870.1 | UniProt:G1JSI6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0005886 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0015935 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0022627 | GO:GO:0030529 | InterPro:IPR013810 |
| InterPro:IPR014721 | RefSeq:NP_176134.1 | PFAM:PF00333 | PFAM:PF03719 | PO:PO:0000293 | PO:PO:0009025 |
| PO:PO:0025195 | ScanProsite:PS00585 | PFscan:PS50881 | PANTHER:PTHR13718 | PANTHER:PTHR13718:SF79 | UniProt:Q8L8Y0 |
| InterPro:Ribosomal_S5 | InterPro:Ribosomal_S5_C | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | InterPro:Ribosomal_S5_N | InterPro:Ribosomal_S5_N_CS |
| InterPro:Ribosomal_S5_euk/arc | SUPFAM:SSF54211 | SUPFAM:SSF54768 | TIGRFAMs:TIGR01020 | UniParc:UPI000009DE94 | Symbol:XW6 |
| SEG:seg | : | : | : | : | : |
Description
RPS2AAt1g59359 [Source:UniProtKB/TrEMBL;Acc:G1JSI6]
Coordinates
chr1:+:21688935..21690290
Molecular Weight (calculated)
30743.2 Da
IEP (calculated)
10.942
GRAVY (calculated)
-0.432
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MAERGGEGGA ERGGDRGDFG RGFGGGRGGG RGRDRGPRGR GRRGGRASEE TKWVPVTKLG RLVADNKITK LEQIYLHSLP VKEYQIIDHL VGPTLKDEVM
101: KIMPVQKQTR AGQRTRFKAF VVVGDGNGHV GLGVKCSKEV ATAIRGAIIL AKLSVVPVRR GYWGNKIGKP HTVPCKVTGK CGSVTVRMVP APRGSGIVAA
201: RVPKKVLQFA GIDDVFTSSR GSTKTLGNFV KATFDCLQKT YGFLTPEFWK ETRFSRSPYQ EHTDFLSTKA VSATKVITEG EDQA
101: KIMPVQKQTR AGQRTRFKAF VVVGDGNGHV GLGVKCSKEV ATAIRGAIIL AKLSVVPVRR GYWGNKIGKP HTVPCKVTGK CGSVTVRMVP APRGSGIVAA
201: RVPKKVLQFA GIDDVFTSSR GSTKTLGNFV KATFDCLQKT YGFLTPEFWK ETRFSRSPYQ EHTDFLSTKA VSATKVITEG EDQA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.