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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 10
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G05190.1 Thale cress plastid 80.09 81.17
CDY70611 Canola plastid 80.09 81.17
PGSC0003DMT400061282 Potato extracellular 80.97 80.62
Bra032481.1-P Field mustard plastid 79.65 80.36
CDY06163 Canola plastid 79.65 80.36
CDY46838 Canola plastid 79.2 80.27
CDY49511 Canola plastid 78.76 79.82
GSMUA_Achr5P16270_001 Banana plastid 79.65 79.65
Bra015397.1-P Field mustard plastid 78.32 79.37
KRH09014 Soybean nucleus 78.32 78.32
KRH38479 Soybean plastid 76.99 76.99
Os03t0751400-01 Rice plastid 74.78 74.78
HORVU4Hr1G040950.1 Barley plastid 73.89 73.89
Os03t0356300-01 Rice nucleus 73.89 73.89
TraesCS4B01G157100.1 Wheat plastid 73.89 73.89
TraesCS4D01G164500.1 Wheat golgi 73.89 73.89
TraesCS5A01G279700.1 Wheat golgi 73.45 73.45
TraesCS4A01G144500.1 Wheat plastid 73.01 73.01
EER92258 Sorghum plastid 69.91 69.91
Solyc12g100160.1.1 Tomato plastid 79.2 69.65
Zm00001d029201_P001 Maize plastid 69.03 69.03
CDY41816 Canola endoplasmic reticulum 53.54 58.17
Bra035618.1-P Field mustard endoplasmic reticulum, golgi 53.54 53.07
Zm00001d047462_P001 Maize cytosol 69.47 52.68
VIT_04s0023g01810.t01 Wine grape cytosol, extracellular 18.58 41.18
Protein Annotations
EntrezGene:100263647wikigene:100263647MapMan:17.7.2.1.6Gene3D:3.90.930.12ProteinID:CBI28941ProteinID:CBI28941.3
UniProt:D7TEL8EMBL:FN595765GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003735
GO:GO:0005198GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005840GO:GO:0006412GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0019538GO:GO:0019843GO:GO:0030529InterPro:IPR036789EntrezGene:LOC100263647wikigene:LOC100263647
HAMAP:MF_01365_BPFAM:PF00347PIRSF:PIRSF002162PRINTS:PR00059ScanProsite:PS00525PANTHER:PTHR11655
PANTHER:PTHR11655:SF14InterPro:Ribosomal_L6InterPro:Ribosomal_L6_CSInterPro:Ribosomal_L6_a/b-domInterPro:Ribosomal_L6_a/b-dom_sfInterPro:Ribosomal_L6_bac-type
SUPFAM:SSF56053TIGR:TC63713TIGRFAMs:TIGR03654UniParc:UPI0001BE2FEAArrayExpress:VIT_12s0059g02250EnsemblPlantsGene:VIT_12s0059g02250
EnsemblPlants:VIT_12s0059g02250.t01unigene:Vvi.13821RefSeq:XP_002279657RefSeq:XP_002279657.2::
Description
No Description!
Coordinates
chr12:-:7051634..7054961
Molecular Weight (calculated)
25150.7 Da
IEP (calculated)
10.751
GRAVY (calculated)
-0.466
Length
226 amino acids
Sequence
(BLAST)
001: MASSITPSFQ TSNLRSAFLG ERNGIYVSSV PVTRVGFLRK TIECKESRIG KKPIEVPSNV TITLEGQDLK VKGPLGELSR TYPREVKVQK DESGILTVKK
101: AFETRRANQM HGLFRTLTDN MVVGVSKGFE KRLQLVGVGY RATVEGKDLV LNLGFSHPVR MPIPGDLKVK VEDNTRIIVS GYDKCNIGQF AASVRKWRPP
201: EPYKGKGVKY ADEIVRRKEG KAGKKK
Best Arabidopsis Sequence Match ( AT1G05190.1 )
(BLAST)
001: MASSLVSSFQ PRSAFLGDRN VFKVSSTPFA QVGYSSKTIE CKESRIGKQP IAVPSNVTIA LEGQDLKVKG PLGELALTYP REVELTKEES GFLRVKKTVE
101: TRRANQMHGL FRTLTDNMVV GVSKGFEKKL ILVGVGYRAT VDGKELVLNL GFSHPVKMQI PDSLKVKVEE NTRITVSGYD KSEIGQFAAT VRKWRPPEPY
201: KGKGVKYSDE IVRRKEGKAG KKK
Arabidopsis Description
RPL650S ribosomal protein L6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23049]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.