Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- cytosol 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT1G05190.1 | Thale cress | plastid | 80.09 | 81.17 |
CDY70611 | Canola | plastid | 80.09 | 81.17 |
PGSC0003DMT400061282 | Potato | extracellular | 80.97 | 80.62 |
Bra032481.1-P | Field mustard | plastid | 79.65 | 80.36 |
CDY06163 | Canola | plastid | 79.65 | 80.36 |
CDY46838 | Canola | plastid | 79.2 | 80.27 |
CDY49511 | Canola | plastid | 78.76 | 79.82 |
GSMUA_Achr5P16270_001 | Banana | plastid | 79.65 | 79.65 |
Bra015397.1-P | Field mustard | plastid | 78.32 | 79.37 |
KRH09014 | Soybean | nucleus | 78.32 | 78.32 |
KRH38479 | Soybean | plastid | 76.99 | 76.99 |
Os03t0751400-01 | Rice | plastid | 74.78 | 74.78 |
HORVU4Hr1G040950.1 | Barley | plastid | 73.89 | 73.89 |
Os03t0356300-01 | Rice | nucleus | 73.89 | 73.89 |
TraesCS4B01G157100.1 | Wheat | plastid | 73.89 | 73.89 |
TraesCS4D01G164500.1 | Wheat | golgi | 73.89 | 73.89 |
TraesCS5A01G279700.1 | Wheat | golgi | 73.45 | 73.45 |
TraesCS4A01G144500.1 | Wheat | plastid | 73.01 | 73.01 |
EER92258 | Sorghum | plastid | 69.91 | 69.91 |
Solyc12g100160.1.1 | Tomato | plastid | 79.2 | 69.65 |
Zm00001d029201_P001 | Maize | plastid | 69.03 | 69.03 |
CDY41816 | Canola | endoplasmic reticulum | 53.54 | 58.17 |
Bra035618.1-P | Field mustard | endoplasmic reticulum, golgi | 53.54 | 53.07 |
Zm00001d047462_P001 | Maize | cytosol | 69.47 | 52.68 |
VIT_04s0023g01810.t01 | Wine grape | cytosol, extracellular | 18.58 | 41.18 |
Protein Annotations
EntrezGene:100263647 | wikigene:100263647 | MapMan:17.7.2.1.6 | Gene3D:3.90.930.12 | ProteinID:CBI28941 | ProteinID:CBI28941.3 |
UniProt:D7TEL8 | EMBL:FN595765 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
GO:GO:0019538 | GO:GO:0019843 | GO:GO:0030529 | InterPro:IPR036789 | EntrezGene:LOC100263647 | wikigene:LOC100263647 |
HAMAP:MF_01365_B | PFAM:PF00347 | PIRSF:PIRSF002162 | PRINTS:PR00059 | ScanProsite:PS00525 | PANTHER:PTHR11655 |
PANTHER:PTHR11655:SF14 | InterPro:Ribosomal_L6 | InterPro:Ribosomal_L6_CS | InterPro:Ribosomal_L6_a/b-dom | InterPro:Ribosomal_L6_a/b-dom_sf | InterPro:Ribosomal_L6_bac-type |
SUPFAM:SSF56053 | TIGR:TC63713 | TIGRFAMs:TIGR03654 | UniParc:UPI0001BE2FEA | ArrayExpress:VIT_12s0059g02250 | EnsemblPlantsGene:VIT_12s0059g02250 |
EnsemblPlants:VIT_12s0059g02250.t01 | unigene:Vvi.13821 | RefSeq:XP_002279657 | RefSeq:XP_002279657.2 | : | : |
Description
No Description!
Coordinates
chr12:-:7051634..7054961
Molecular Weight (calculated)
25150.7 Da
IEP (calculated)
10.751
GRAVY (calculated)
-0.466
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSITPSFQ TSNLRSAFLG ERNGIYVSSV PVTRVGFLRK TIECKESRIG KKPIEVPSNV TITLEGQDLK VKGPLGELSR TYPREVKVQK DESGILTVKK
101: AFETRRANQM HGLFRTLTDN MVVGVSKGFE KRLQLVGVGY RATVEGKDLV LNLGFSHPVR MPIPGDLKVK VEDNTRIIVS GYDKCNIGQF AASVRKWRPP
201: EPYKGKGVKY ADEIVRRKEG KAGKKK
101: AFETRRANQM HGLFRTLTDN MVVGVSKGFE KRLQLVGVGY RATVEGKDLV LNLGFSHPVR MPIPGDLKVK VEDNTRIIVS GYDKCNIGQF AASVRKWRPP
201: EPYKGKGVKY ADEIVRRKEG KAGKKK
001: MASSLVSSFQ PRSAFLGDRN VFKVSSTPFA QVGYSSKTIE CKESRIGKQP IAVPSNVTIA LEGQDLKVKG PLGELALTYP REVELTKEES GFLRVKKTVE
101: TRRANQMHGL FRTLTDNMVV GVSKGFEKKL ILVGVGYRAT VDGKELVLNL GFSHPVKMQI PDSLKVKVEE NTRITVSGYD KSEIGQFAAT VRKWRPPEPY
201: KGKGVKYSDE IVRRKEGKAG KKK
101: TRRANQMHGL FRTLTDNMVV GVSKGFEKKL ILVGVGYRAT VDGKELVLNL GFSHPVKMQI PDSLKVKVEE NTRITVSGYD KSEIGQFAAT VRKWRPPEPY
201: KGKGVKYSDE IVRRKEGKAG KKK
Arabidopsis Description
RPL650S ribosomal protein L6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23049]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.