Factsheet for AT1G11810.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G13830.1	Thale cress	plastid	78.78	78.78
AT1G66490.1	Thale cress	cytosol	41.64	43.61
AT3G13680.1	Thale cress	cytosol	44.03	42.03
AT3G49510.1	Thale cress	cytosol	40.85	39.69
AT1G54550.1	Thale cress	cytosol	37.67	39.23
AT3G49520.1	Thale cress	cytosol	39.79	38.66
AT3G19560.1	Thale cress	cytosol	35.81	37.4
AT4G17200.1	Thale cress	cytosol	36.6	36.22
AT3G20030.1	Thale cress	cytosol	37.93	35.57
AT1G59680.2	Thale cress	cytosol	29.44	35.02
AT1G24881.1	Thale cress	nucleus	39.79	34.64
AT1G25211.1	Thale cress	nucleus	39.79	34.64
AT1G25150.1	Thale cress	nucleus	39.79	34.64
AT1G25055.1	Thale cress	nucleus	39.79	34.64
AT1G24800.1	Thale cress	nucleus	39.79	34.64
AT3G13820.1	Thale cress	nucleus	37.93	34.46
AT3G19880.1	Thale cress	cytosol	35.28	34.19
AT1G67450.1	Thale cress	cytosol	36.07	34.17
AT5G51000.1	Thale cress	cytosol	33.69	33.6
AT3G14030.1	Thale cress	cytosol	17.77	33.5
AT4G05080.1	Thale cress	cytosol	34.48	33.25
AT5G60560.2	Thale cress	cytosol	35.54	32.92
AT3G19890.1	Thale cress	cytosol	34.22	31.46
AT1G32140.1	Thale cress	cytosol, peroxisome, plastid	36.34	23.18

Protein Annotations

MapMan:35.1	EntrezGene:837729	UniProt:A0A178W4N3	ProteinID:AAD30240.1	ProteinID:AEE28789.1	ArrayExpress:AT1G11810
EnsemblPlantsGene:AT1G11810	RefSeq:AT1G11810	TAIR:AT1G11810	RefSeq:AT1G11810-TAIR-G	EnsemblPlants:AT1G11810.1	TAIR:AT1G11810.1
Unigene:At.73943	EMBL:BT015465	EMBL:BT029542	InterPro:F-box-assoc_dom_typ1	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:IPR001810	RefSeq:NP_172646.3	ProteinID:OAP13460.1
PFAM:PF00646	PFAM:PF07734	PANTHER:PTHR31790	UniProt:Q9SA94	SUPFAM:SSF81383	TIGRFAMs:TIGR01640
UniParc:UPI000009E887	:	:	:	:	:

Description

F-box protein At1g11810 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA94]

Coordinates

chr1:+:3989763..3991066

Molecular Weight (calculated)

42483.4 Da

IEP (calculated)

5.024

GRAVY (calculated)

-0.116

Length

377 amino acids

Sequence
(BLAST)

001: MTTTMSTLPV VLVDEILARV PITSLRSLRS TCKKWEASSK TNLVGGKATA RKSSHVGFIL IGDKICSMKL DLNGGDDFVD TSVNQVSAFD GFAISQLFHC
101: DGLLFCISNN HYSNYTLMVC NMYLGETRLI QNRSLFESYQ NFCSYAFGYD SSKNRNHKIL RNNSVSGGYE IYSLKSDSWK DLNVDLEKSI HLWRLGSVSL
201: KGNAYFRVIK VIEEGVWEYN LLCFDFTRES FGKLLSLPFE SLGDEGEGIM VISCVRDDHL AVLYQRDTLG IWISTEIEPN KVSWREFLQV DLATLDGFPD
301: VFIAGRFIVD EEKQVVVVFG QETELDLNHG NAFIFGRDGY FTSFTVGDAP PEDFTSYVPS LVSLQIDKTG KRKARDD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.