Factsheet for AT3G49520.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G49510.1	Thale cress	cytosol	70.36	70.36
AT1G54550.1	Thale cress	cytosol	57.47	61.6
AT1G66490.1	Thale cress	cytosol	46.13	49.72
AT3G13680.1	Thale cress	cytosol	49.74	48.86
AT4G17200.1	Thale cress	cytosol	42.27	43.04
Bra018376.1-P	Field mustard	cytosol	25.77	42.92
AT1G59680.2	Thale cress	cytosol	35.05	42.9
CDY45456	Canola	cytosol	25.77	42.55
AT3G19560.1	Thale cress	cytosol	39.18	42.11
AT1G24800.1	Thale cress	nucleus	46.65	41.8
AT1G25211.1	Thale cress	nucleus	46.65	41.8
AT1G25150.1	Thale cress	nucleus	46.65	41.8
AT1G25055.1	Thale cress	nucleus	46.65	41.8
AT1G24881.1	Thale cress	nucleus	46.65	41.8
AT3G20030.1	Thale cress	cytosol	43.3	41.79
AT3G14030.1	Thale cress	cytosol	21.39	41.5
AT3G19880.1	Thale cress	cytosol	41.24	41.13
AT3G13830.1	Thale cress	plastid	39.69	40.85
AT5G60560.2	Thale cress	cytosol	42.27	40.29
AT5G51000.1	Thale cress	cytosol	39.18	40.21
AT1G11810.1	Thale cress	cytosol	38.66	39.79
AT1G67450.1	Thale cress	cytosol	40.46	39.45
AT4G05080.1	Thale cress	cytosol	39.43	39.13
AT3G13820.1	Thale cress	nucleus	41.49	38.8
AT3G19890.1	Thale cress	cytosol	40.72	38.54
AT1G32140.1	Thale cress	cytosol, peroxisome, plastid	41.75	27.41

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EntrezGene:824114	ProteinID:AEE78552.1	ArrayExpress:AT3G49520	EnsemblPlantsGene:AT3G49520
RefSeq:AT3G49520	TAIR:AT3G49520	RefSeq:AT3G49520-TAIR-G	EnsemblPlants:AT3G49520.1	TAIR:AT3G49520.1	Unigene:At.53857
ProteinID:CAB62456.1	InterPro:F-box-assoc_dom_typ1	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0031146	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	RefSeq:NP_190521.1	PFAM:PF00646	PFAM:PF07734
PFscan:PS50181	PANTHER:PTHR31790	UniProt:Q9SCK7	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383
TIGRFAMs:TIGR01640	UniParc:UPI00000A313F	SEG:seg	:	:	:

Description

Putative F-box protein At3g49520 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCK7]

Coordinates

chr3:+:18359584..18360750

Molecular Weight (calculated)

45013.3 Da

IEP (calculated)

4.671

GRAVY (calculated)

-0.290

Length

388 amino acids

Sequence
(BLAST)

001: MTTISDLPYD LVKEIFSWVP FTSLRAVRST CKTWNALSKN QIFGKKSVAR NQFLELMILD SRVCSLRFDL QKIRNEDEED LVDPSMKQIS IPNNDDQVEI
101: SRVYHCDGLL LCIPKDNSSL MLWNPYLGQT KRIRPKNTFH RDDSFALGYN NRNHKILRLN EENESHIDVY DFSSDSWRTV PDDNPYRDEL IYQSGVSLKG
201: NAYFFDREVT TEAEVGTEDL LITGIEDYLR CFDFTTERFG PRLPLPFILP SPSFEYLALS WARDDKLAVL YSHYDTFDII EIWISTKIEP NAVSWSTFLK
301: VDMSLINGLT DDFLIRFEPK SFFIDEEKKV AVLFDTKVTE TCRYQMAYIV GDDGYFKSVN IGVISNSHWI GGELVRSSYV PSLLQLQV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.