Factsheet for AT5G51000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G19560.1	Thale cress	cytosol	48.15	50.42
CDY23772	Canola	cytosol	31.22	44.36
Bra021825.1-P	Field mustard	cytosol	33.86	42.95
AT1G66490.1	Thale cress	cytosol	39.95	41.94
AT3G20030.1	Thale cress	cytosol	43.92	41.29
AT3G49510.1	Thale cress	cytosol	41.53	40.46
AT3G13680.1	Thale cress	cytosol	41.8	40.0
AT3G49520.1	Thale cress	cytosol	40.21	39.18
CDY69271	Canola	cytosol	37.57	39.01
Bra021823.1-P	Field mustard	cytosol	37.3	38.74
AT1G67450.1	Thale cress	cytosol	40.48	38.44
AT1G54550.1	Thale cress	cytosol	36.77	38.4
AT5G60560.2	Thale cress	cytosol	40.74	37.84
AT3G19880.1	Thale cress	cytosol	38.89	37.79
AT4G17200.1	Thale cress	cytosol	37.83	37.53
AT3G14030.1	Thale cress	cytosol	19.84	37.5
AT4G05080.1	Thale cress	cytosol	37.83	36.57
AT1G25211.1	Thale cress	nucleus	41.27	36.03
AT1G25150.1	Thale cress	nucleus	41.27	36.03
AT1G25055.1	Thale cress	nucleus	41.27	36.03
AT1G24881.1	Thale cress	nucleus	41.27	36.03
AT1G24800.1	Thale cress	nucleus	41.27	36.03
AT3G19890.1	Thale cress	cytosol	38.89	35.85
AT1G59680.2	Thale cress	cytosol	29.1	34.7
AT3G13830.1	Thale cress	plastid	34.39	34.48
AT1G11810.1	Thale cress	cytosol	33.6	33.69
AT3G13820.1	Thale cress	nucleus	36.51	33.25
AT1G32140.1	Thale cress	cytosol, peroxisome, plastid	41.8	26.73

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EntrezGene:835173	UniProt:A0A178UFB8	ProteinID:AED96020.1	ArrayExpress:AT5G51000
EnsemblPlantsGene:AT5G51000	RefSeq:AT5G51000	TAIR:AT5G51000	RefSeq:AT5G51000-TAIR-G	EnsemblPlants:AT5G51000.1	TAIR:AT5G51000.1
Unigene:At.65665	ProteinID:BAB08746.1	InterPro:F-box-assoc_dom_typ1	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0031146	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	RefSeq:NP_199913.1	ProteinID:OAO92330.1
PFAM:PF00646	PFAM:PF07734	PANTHER:PTHR44355	PANTHER:PTHR44355:SF1	UniProt:Q9FI48	SMART:SM00256
SUPFAM:SSF50965	SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI00000A05BF	SEG:seg	:

Description

Putative F-box protein At5g51000 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI48]

Coordinates

chr5:-:20742533..20743669

Molecular Weight (calculated)

44155.3 Da

IEP (calculated)

7.264

GRAVY (calculated)

-0.263

Length

378 amino acids

Sequence
(BLAST)

001: MSTMSDLFPD LVEEILSRVP ITSLKAVKLT CKQWNDLSKD SSFTKNHYGK EAKEIQVIMI CDLKACLMSV NLHNHKDLAD PSIKQIGKLN QVEIDSVFHC
101: DGLLLLLLCN PKDNSKLMVW NPYLGQTRWI QPRNNSHKHR PAGRFNHRPA GRFYMGYDSN NNHKILWFSS MYREYEIYDF KSDAWTVIDV NTDQDHIIDN
201: QRVSLKGNVY FIAHDILKEE AFLLSFDFTC ERFGPSLPLP FHCCHEDTVL LSTVREEQLA VLFQKSDAYE MGIWITTKIE LNIVLWSKFL KVDMTLPNSY
301: WFEDLSFFLV DEKKKVAMVS ELDIETCKNY KTYILGENGY YREVDLRKSK GCVYLCVLMF QVWCKSSKVP VLARCERK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.