Factsheet for AT1G32140.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G19880.1	Thale cress	cytosol	34.18	51.93
AT5G60560.2	Thale cress	cytosol	33.16	48.16
AT3G20030.1	Thale cress	cytosol	32.49	47.76
AT4G05080.1	Thale cress	cytosol	30.8	46.55
AT3G19890.1	Thale cress	cytosol	31.98	46.1
AT3G19560.1	Thale cress	cytosol	27.58	45.15
AT1G66490.1	Thale cress	cytosol	27.41	45.0
AT3G49510.1	Thale cress	cytosol	29.27	44.59
AT3G13680.1	Thale cress	cytosol	29.27	43.8
AT1G67450.1	Thale cress	cytosol	29.27	43.47
AT4G17200.1	Thale cress	cytosol	27.24	42.26
AT5G51000.1	Thale cress	cytosol	26.73	41.8
AT3G49520.1	Thale cress	cytosol	27.41	41.75
AT1G54550.1	Thale cress	cytosol	25.38	41.44
AT1G24800.1	Thale cress	nucleus	30.29	41.34
AT1G25211.1	Thale cress	nucleus	30.29	41.34
AT1G25150.1	Thale cress	nucleus	30.29	41.34
AT1G25055.1	Thale cress	nucleus	30.29	41.34
AT1G24881.1	Thale cress	nucleus	30.29	41.34
AT1G59680.2	Thale cress	cytosol	20.3	37.85
AT3G14030.1	Thale cress	cytosol	12.52	37.0
AT3G13820.1	Thale cress	nucleus	25.72	36.63
AT1G11810.1	Thale cress	cytosol	23.18	36.34
AT3G13830.1	Thale cress	plastid	23.01	36.07

Protein Annotations

MapMan:35.1	EntrezGene:840106	ProteinID:AAG23440.1	ProteinID:AEE31440.1	ArrayExpress:AT1G32140	EnsemblPlantsGene:AT1G32140
RefSeq:AT1G32140	TAIR:AT1G32140	RefSeq:AT1G32140-TAIR-G	EnsemblPlants:AT1G32140.1	TAIR:AT1G32140.1	Unigene:At.51871
ncoils:Coil	InterPro:F-box-assoc_dom_typ1	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0031146	InterPro:IPR001810	RefSeq:NP_174493.1	PFAM:PF00646	PFAM:PF07734	UniProt:Q9FVQ9
SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI00000A7C70	SEG:seg	:	:

Description

Putative F-box protein At1g32140 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVQ9]

Coordinates

chr1:-:11562742..11564833

Molecular Weight (calculated)

68651.3 Da

IEP (calculated)

7.795

GRAVY (calculated)

-0.356

Length

591 amino acids

Sequence
(BLAST)

001: MTMMSDLSLD LVEEILCRVP ITSLKAVRSS CKLWNVLSKN RILCKTEARN QFLGFTIMNH RLYSMRFNLH GIGLNENSEE FIDPSIKPIG NLLNQVEISK
101: VFYCEGLLLC VTRNHSSKLV VWNPYLGEIR WIKTRNDYHI GVTYALGYDN NKNHMILRFF SEQGYYEIYD MNSSDSWDCF YGIPNKGLKC YQPGASLNGN
201: AYFLTEGREV MEGYDCLLGF DFTTKKFGPL LSLSFSHDFI ETGRLSCVKG EKLAVLYQRC YTYEMEVWVT TKIEPNAVSW SKFLAVEMEP LTSLKFNDDS
301: GSFFIDEEKK IVVVFDIDES ERNNTAYIIG DYGCLKEVDL DEVVNPQESV EVGDRIYSFS PFVCSCSYVP SLVKFKEDAE HERKDKKRKS KRKRTNKDGY
401: DFILCFDFTT ERFGQILPLP FKHSFRDTWT LSSVKEEKLA VAVLYWKNTC VMIEIWMTIK IDPNVESWSK FLRVDRKPCI DLRFDDRNDS FFIDEEKKVV
501: VFFSSDKVKT STAYVIGDNR YLRTVDLEKA ANSQESVEVG ERVYCFSPLV CSCSYYVPSL VKINHNAGRK RKEKKTKRKS KDKQMKLSNK V

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.