Factsheet for AT1G66490.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G49510.1	Thale cress	cytosol	54.44	50.52
AT3G13680.1	Thale cress	cytosol	51.39	46.84
CDX82226	Canola	cytosol	33.89	46.39
AT3G49520.1	Thale cress	cytosol	49.72	46.13
CDY67602	Canola	cytosol	46.11	45.86
CDY32393	Canola	mitochondrion	29.72	45.73
AT1G54550.1	Thale cress	cytosol	45.83	45.58
Bra001803.1-P	Field mustard	cytosol	46.94	45.31
CDY32394	Canola	cytosol	47.78	45.03
CDY67601	Canola	cytosol	46.94	44.24
CDX94566	Canola	cytosol	26.11	43.32
AT4G17200.1	Thale cress	cytosol	45.56	43.04
AT3G19880.1	Thale cress	cytosol	45.83	42.42
AT1G59680.2	Thale cress	cytosol	37.22	42.27
AT3G19560.1	Thale cress	cytosol	42.22	42.11
AT3G14030.1	Thale cress	cytosol	23.33	42.0
AT1G11810.1	Thale cress	cytosol	43.61	41.64
AT3G20030.1	Thale cress	cytosol	45.83	41.04
Bra029507.1-P	Field mustard	cytosol	45.0	40.91
AT3G13830.1	Thale cress	plastid	42.5	40.58
AT5G60560.2	Thale cress	cytosol	45.83	40.54
AT5G51000.1	Thale cress	cytosol	41.94	39.95
AT3G19890.1	Thale cress	cytosol	45.28	39.76
AT1G24800.1	Thale cress	nucleus	46.94	39.03
AT1G25211.1	Thale cress	nucleus	46.94	39.03
AT1G25150.1	Thale cress	nucleus	46.94	39.03
AT1G25055.1	Thale cress	nucleus	46.94	39.03
AT1G24881.1	Thale cress	nucleus	46.94	39.03
AT4G05080.1	Thale cress	cytosol	41.39	38.11
AT1G67450.1	Thale cress	cytosol	41.94	37.94
AT3G13820.1	Thale cress	nucleus	43.06	37.35
CDY68693	Canola	cytosol	39.72	29.73
AT1G32140.1	Thale cress	cytosol, peroxisome, plastid	45.0	27.41

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	ArrayExpress:AT1G66490	EnsemblPlantsGene:AT1G66490	RefSeq:AT1G66490	TAIR:AT1G66490
RefSeq:AT1G66490-TAIR-G	EnsemblPlants:AT1G66490.1	TAIR:AT1G66490.1	InterPro:F-box-assoc_dom_typ1	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:IPR001810	PFAM:PF00646	PFAM:PF07734
PO:PO:0000084	PFscan:PS50181	PANTHER:PTHR31790	SMART:SM00256	SUPFAM:SSF81383	TIGRFAMs:TIGR01640
UniParc:UPI00000A0909	:	:	:	:	:

Description

F-box and associated interaction domains-containing protein [Source:TAIR;Acc:AT1G66490]

Coordinates

chr1:-:24809421..24810549

Molecular Weight (calculated)

41707.0 Da

IEP (calculated)

7.713

GRAVY (calculated)

-0.117

Length

360 amino acids

Sequence
(BLAST)

001: MRTISDLPVA LVEEILSRVP LTSLSAVRST CKTWNALSKT QIFGKTRQQF LGFMMIDFGL YSIKFDLQGL NYESDFVEPS IKRVSILDQL DIFKVFHCEG
101: LLLCVFRGNR WPVVWNPYLG GTGWIQPISD FHKYQVSDKF AFGYENKNHF FGFYDIYDLN SSAWKVLDVN PDCDIKCGVS LKGKTYFFAK EIAKAPNVKD
201: FLVCFDFTAE RFGPRLPLPF HSCGLFSEHV TLSCVRDEHL AVLYRRYNGV MEIYITTKIE PNEVFWSNFL KVDLTTFPDR FYGSRSHYFF IDEEKKVAVV
301: FKNEPEWTMD CSYQTAYIIG KGGYLKSVKF GETPNDRKHN NAWNINSFML SSYVPSLVQL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.