Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82226 | Canola | cytosol | 52.99 | 47.15 |
| CDY32394 | Canola | cytosol | 73.93 | 45.29 |
| CDY67601 | Canola | cytosol | 73.5 | 45.03 |
| CDY67602 | Canola | cytosol | 65.38 | 42.27 |
| AT3G14030.1 | Thale cress | cytosol | 33.33 | 39.0 |
| CDY70219 | Canola | cytosol | 27.35 | 35.96 |
| CDY01863 | Canola | cytosol | 35.9 | 33.73 |
| CDY45456 | Canola | cytosol | 32.48 | 32.34 |
| CDY37490 | Canola | mitochondrion | 23.08 | 32.14 |
| CDY43734 | Canola | mitochondrion, nucleus, plastid, vacuole | 26.07 | 31.44 |
| AT1G66490.1 | Thale cress | cytosol | 45.73 | 29.72 |
| CDY65844 | Canola | extracellular | 32.91 | 28.84 |
| CDX84915 | Canola | cytosol | 40.17 | 27.98 |
| CDY70726 | Canola | cytosol | 26.5 | 27.93 |
| CDY23772 | Canola | cytosol | 29.49 | 25.94 |
| CDY40874 | Canola | mitochondrion | 38.89 | 24.27 |
| CDY69763 | Canola | cytosol | 26.07 | 23.92 |
| AT3G13820.1 | Thale cress | nucleus | 42.31 | 23.86 |
| CDY62603 | Canola | cytosol | 38.46 | 23.68 |
| CDX82277 | Canola | cytosol | 40.17 | 23.62 |
| CDY71800 | Canola | cytosol | 38.03 | 23.42 |
| CDY43729 | Canola | cytosol | 38.03 | 23.18 |
| CDY33027 | Canola | cytosol | 37.61 | 23.04 |
| CDX82230 | Canola | cytosol | 39.74 | 23.02 |
| CDX80282 | Canola | cytosol | 38.03 | 23.0 |
| CDY25355 | Canola | cytosol | 36.32 | 22.91 |
| CDY19516 | Canola | cytosol | 34.19 | 22.73 |
| CDY56208 | Canola | nucleus | 38.46 | 22.73 |
| AT1G59680.2 | Thale cress | cytosol | 30.77 | 22.71 |
| CDY33422 | Canola | cytosol | 39.74 | 21.93 |
| CDX78894 | Canola | cytosol | 34.62 | 21.77 |
| CDY03068 | Canola | nucleus | 37.18 | 21.38 |
| CDX72756 | Canola | cytosol | 37.61 | 21.05 |
| CDY17608 | Canola | cytosol | 36.32 | 20.94 |
| CDY69271 | Canola | cytosol | 32.48 | 20.88 |
| CDY07015 | Canola | cytosol | 34.19 | 20.78 |
| CDY17609 | Canola | plastid | 38.89 | 20.54 |
| CDX93257 | Canola | cytosol | 33.76 | 20.31 |
| CDY43733 | Canola | cytosol | 28.21 | 20.31 |
| CDY22955 | Canola | cytosol | 17.09 | 20.2 |
| CDY03069 | Canola | plastid | 37.61 | 19.73 |
| CDY71567 | Canola | cytosol | 33.76 | 19.65 |
| CDY67865 | Canola | cytosol | 40.17 | 19.03 |
| CDY37477 | Canola | nucleus | 14.96 | 18.72 |
| CDX87320 | Canola | cytosol, extracellular, mitochondrion, nucleus | 27.78 | 18.21 |
| CDY68693 | Canola | cytosol | 35.9 | 17.46 |
| CDY43730 | Canola | cytosol | 18.38 | 16.93 |
| CDY57669 | Canola | cytosol | 28.21 | 16.71 |
| CDY37492 | Canola | cytosol | 14.96 | 16.13 |
| CDY45455 | Canola | cytosol | 5.56 | 12.26 |
| CDX94566 | Canola | cytosol | 8.55 | 9.22 |
| CDX99431 | Canola | cytosol | 6.84 | 8.0 |
| CDY37491 | Canola | cytosol | 2.99 | 7.22 |
| CDY43731 | Canola | cytosol | 4.7 | 6.29 |
| CDX78893 | Canola | cytosol | 3.85 | 5.56 |
| CDY70218 | Canola | plastid | 1.28 | 3.85 |
Protein Annotations
| EnsemblPlants:CDY32393 | EnsemblPlantsGene:GSBRNA2T00051972001 | InterPro:F-box-assoc_dom_typ1 | InterPro:F-box-assoc_interact_dom | PANTHER:PTHR44355 | PFAM:PF07734 |
| ProteinID:CDY32393 | ProteinID:CDY32393.1 | TIGRFAMs:TIGR01640 | UniParc:UPI0004EEE4ED | UniProt:A0A078H6E3 | MapMan:35.1 |
Description
BnaC03g41770DBnaC03g41770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6E3]
Coordinates
chrLK032294:-:74976..75816
Molecular Weight (calculated)
27009.6 Da
IEP (calculated)
9.400
GRAVY (calculated)
-0.148
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLSLGRLA VIYASSKMRG GFLCGTQLGP FYEIYDFNSN SWRVLDVDQG CCNIRSGVSV KGNTYFLAEE TRFEYFLLCF DFTAERFGQR IVLPFGACVS
101: FSKTVVLSRV RDEQLAVLHQ LEDNNVMEFW ITSKIEPNAA SWTRFLRVEM TPFRFVTESF FIDEEKKLAL VSGFCKEFRT NYKRAYIIEE HGNIKSVEIG
201: KARKPGNKLV FSSYAPNLVQ LRINRRVKRK EKVC
101: FSKTVVLSRV RDEQLAVLHQ LEDNNVMEFW ITSKIEPNAA SWTRFLRVEM TPFRFVTESF FIDEEKKLAL VSGFCKEFRT NYKRAYIIEE HGNIKSVEIG
201: KARKPGNKLV FSSYAPNLVQ LRINRRVKRK EKVC
001: MRTISDLPVA LVEEILSRVP LTSLSAVRST CKTWNALSKT QIFGKTRQQF LGFMMIDFGL YSIKFDLQGL NYESDFVEPS IKRVSILDQL DIFKVFHCEG
101: LLLCVFRGNR WPVVWNPYLG GTGWIQPISD FHKYQVSDKF AFGYENKNHF FGFYDIYDLN SSAWKVLDVN PDCDIKCGVS LKGKTYFFAK EIAKAPNVKD
201: FLVCFDFTAE RFGPRLPLPF HSCGLFSEHV TLSCVRDEHL AVLYRRYNGV MEIYITTKIE PNEVFWSNFL KVDLTTFPDR FYGSRSHYFF IDEEKKVAVV
301: FKNEPEWTMD CSYQTAYIIG KGGYLKSVKF GETPNDRKHN NAWNINSFML SSYVPSLVQL
101: LLLCVFRGNR WPVVWNPYLG GTGWIQPISD FHKYQVSDKF AFGYENKNHF FGFYDIYDLN SSAWKVLDVN PDCDIKCGVS LKGKTYFFAK EIAKAPNVKD
201: FLVCFDFTAE RFGPRLPLPF HSCGLFSEHV TLSCVRDEHL AVLYRRYNGV MEIYITTKIE PNEVFWSNFL KVDLTTFPDR FYGSRSHYFF IDEEKKVAVV
301: FKNEPEWTMD CSYQTAYIIG KGGYLKSVKF GETPNDRKHN NAWNINSFML SSYVPSLVQL
Arabidopsis Description
F-box and associated interaction domains-containing protein [Source:TAIR;Acc:AT1G66490]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.