Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82230 | Canola | cytosol | 92.93 | 45.54 |
| CDY69763 | Canola | cytosol | 55.56 | 43.14 |
| CDX82277 | Canola | cytosol | 75.25 | 37.44 |
| CDY33422 | Canola | cytosol | 64.14 | 29.95 |
| CDY37477 | Canola | nucleus | 26.26 | 27.81 |
| CDY25355 | Canola | cytosol | 49.49 | 26.42 |
| CDY37492 | Canola | cytosol | 28.79 | 26.27 |
| AT3G20030.1 | Thale cress | cytosol | 52.53 | 25.87 |
| AT5G60560.2 | Thale cress | cytosol | 53.03 | 25.8 |
| CDY43733 | Canola | cytosol | 38.89 | 23.69 |
| CDY71800 | Canola | cytosol | 43.43 | 22.63 |
| CDY07015 | Canola | cytosol | 43.94 | 22.6 |
| CDY40874 | Canola | mitochondrion | 42.42 | 22.4 |
| CDX80282 | Canola | cytosol | 43.43 | 22.22 |
| CDY33027 | Canola | cytosol | 42.42 | 21.99 |
| CDY19516 | Canola | cytosol | 38.89 | 21.88 |
| CDX93257 | Canola | cytosol | 42.42 | 21.59 |
| CDY43731 | Canola | cytosol | 18.69 | 21.14 |
| CDX87320 | Canola | cytosol, extracellular, mitochondrion, nucleus | 37.88 | 21.01 |
| CDY65844 | Canola | extracellular | 28.28 | 20.97 |
| CDY43729 | Canola | cytosol | 39.9 | 20.57 |
| CDY70218 | Canola | plastid | 8.08 | 20.51 |
| CDY70726 | Canola | cytosol | 22.73 | 20.27 |
| CDY37490 | Canola | mitochondrion | 17.17 | 20.24 |
| CDY70219 | Canola | cytosol | 18.18 | 20.22 |
| CDY17608 | Canola | cytosol | 40.91 | 19.95 |
| CDY23772 | Canola | cytosol | 26.77 | 19.92 |
| CDX78894 | Canola | cytosol | 37.37 | 19.89 |
| CDX78893 | Canola | cytosol | 16.16 | 19.75 |
| CDY03068 | Canola | nucleus | 40.4 | 19.66 |
| CDY67602 | Canola | cytosol | 35.86 | 19.61 |
| CDY43734 | Canola | mitochondrion, nucleus, plastid, vacuole | 19.19 | 19.59 |
| CDY69271 | Canola | cytosol | 35.86 | 19.51 |
| CDY03069 | Canola | plastid | 43.43 | 19.28 |
| CDX84915 | Canola | cytosol | 32.32 | 19.05 |
| CDY45456 | Canola | cytosol | 22.22 | 18.72 |
| CDY62603 | Canola | cytosol | 35.86 | 18.68 |
| CDX82226 | Canola | cytosol | 24.75 | 18.63 |
| CDY37491 | Canola | cytosol | 9.09 | 18.56 |
| CDY32394 | Canola | cytosol | 35.35 | 18.32 |
| CDY67601 | Canola | cytosol | 34.85 | 18.06 |
| CDY17609 | Canola | plastid | 40.4 | 18.06 |
| CDX99431 | Canola | cytosol | 18.18 | 18.0 |
| CDX94566 | Canola | cytosol | 19.7 | 17.97 |
| CDY71567 | Canola | cytosol | 36.36 | 17.91 |
| CDY32393 | Canola | mitochondrion | 20.2 | 17.09 |
| CDY56208 | Canola | nucleus | 33.33 | 16.67 |
| CDY45455 | Canola | cytosol | 8.59 | 16.04 |
| CDY67865 | Canola | cytosol | 39.39 | 15.79 |
| CDY43730 | Canola | cytosol | 19.19 | 14.96 |
| CDY01863 | Canola | cytosol | 18.69 | 14.86 |
| CDX72756 | Canola | cytosol | 30.81 | 14.59 |
| CDY57669 | Canola | cytosol | 28.28 | 14.18 |
| CDY68693 | Canola | cytosol | 32.83 | 13.51 |
Protein Annotations
| EnsemblPlants:CDY22955 | EnsemblPlantsGene:GSBRNA2T00021354001 | InterPro:F-box-assoc_dom_typ1 | InterPro:F-box-assoc_interact_dom | PFAM:PF07734 | ProteinID:CDY22955 |
| ProteinID:CDY22955.1 | TIGRFAMs:TIGR01640 | UniParc:UPI0004EDCDC4 | UniProt:A0A078G958 | MapMan:35.1 | : |
Description
BnaC03g41140DBnaC03g41140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G958]
Coordinates
chrLK032138:-:170532..171746
Molecular Weight (calculated)
22983.1 Da
IEP (calculated)
4.553
GRAVY (calculated)
-0.246
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIISDLSWD LVEKILARVP IFSIGADKEE NKTSLVVWNP YLGQTRWIQP KNYYYRLDVY ALGYDINKRK HKILRFFADA YNPNAVSWVP FLKIDLEPLT
101: GFEFQFHHYG ASFFIDEEKK VAVVFQIDES EMTCYDTAYL IGENGYFEKV GLGEADNHLD SIPMEDYCPL VCSCSYVPSL VHINNEFVKE EANEGDHH
101: GFEFQFHHYG ASFFIDEEKK VAVVFQIDES EMTCYDTAYL IGENGYFEKV GLGEADNHLD SIPMEDYCPL VCSCSYVPSL VHINNEFVKE EANEGDHH
001: MTTISDLPKE LVEEIISGVP TKLMRAVRGD NTRLVVWNPY IGQTRSIKLV KGWDTCSYAF GCLEKNKKSC RSHKILRFLD DDTLYNGRDN FRFKFLKVNT
101: GPEVSLVLES FIIDEEKKVV MVSEGFKHRI SYILGENGYL RELDLGESIY TNCWTQACSY VPSLVQLKQP AGGKRKLQSR ALRLVALDKR INK
101: GPEVSLVLES FIIDEEKKVV MVSEGFKHRI SYILGENGYL RELDLGESIY TNCWTQACSY VPSLVQLKQP AGGKRKLQSR ALRLVALDKR INK
Arabidopsis Description
F-box associated ubiquitination effector family protein [Source:UniProtKB/TrEMBL;Acc:F4J135]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.