Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43731 | Canola | cytosol | 33.69 | 36.0 |
| CDY70218 | Canola | plastid | 14.44 | 34.62 |
| CDY37492 | Canola | cytosol | 39.57 | 34.1 |
| CDY43730 | Canola | cytosol | 45.45 | 33.46 |
| CDY37491 | Canola | cytosol | 17.11 | 32.99 |
| CDX78893 | Canola | cytosol | 25.67 | 29.63 |
| CDY45455 | Canola | cytosol | 16.04 | 28.3 |
| CDX99431 | Canola | cytosol | 29.95 | 28.0 |
| CDX94566 | Canola | cytosol | 31.55 | 27.19 |
| CDY22955 | Canola | cytosol | 27.81 | 26.26 |
| CDY43729 | Canola | cytosol | 52.41 | 25.52 |
| CDY62603 | Canola | cytosol | 48.66 | 23.95 |
| CDY67865 | Canola | cytosol | 62.03 | 23.48 |
| CDY43733 | Canola | cytosol | 40.64 | 23.38 |
| CDY25355 | Canola | cytosol | 45.99 | 23.18 |
| CDY69763 | Canola | cytosol | 31.02 | 22.75 |
| CDX82277 | Canola | cytosol | 47.06 | 22.11 |
| CDY57669 | Canola | cytosol | 46.52 | 22.03 |
| CDX84915 | Canola | cytosol | 39.57 | 22.02 |
| CDY67602 | Canola | cytosol | 42.25 | 21.82 |
| CDX82226 | Canola | cytosol | 30.48 | 21.67 |
| CDY70219 | Canola | cytosol | 20.32 | 21.35 |
| CDX82230 | Canola | cytosol | 45.45 | 21.04 |
| CDY67601 | Canola | cytosol | 42.78 | 20.94 |
| CDY69271 | Canola | cytosol | 40.64 | 20.88 |
| CDY19516 | Canola | cytosol | 39.04 | 20.74 |
| CDX78894 | Canola | cytosol | 41.18 | 20.7 |
| CDY32394 | Canola | cytosol | 42.25 | 20.68 |
| CDX87320 | Canola | cytosol, extracellular, mitochondrion, nucleus | 38.5 | 20.17 |
| CDY33422 | Canola | cytosol | 45.45 | 20.05 |
| CDY40874 | Canola | mitochondrion | 40.11 | 20.0 |
| CDY37490 | Canola | mitochondrion | 17.65 | 19.64 |
| CDY03068 | Canola | nucleus | 42.25 | 19.41 |
| CDY33027 | Canola | cytosol | 39.57 | 19.37 |
| CDY71800 | Canola | cytosol | 38.5 | 18.95 |
| CDX80282 | Canola | cytosol | 39.04 | 18.86 |
| CDY17608 | Canola | cytosol | 40.64 | 18.72 |
| CDY07015 | Canola | cytosol | 38.5 | 18.7 |
| CDX93257 | Canola | cytosol | 38.5 | 18.51 |
| CDY23772 | Canola | cytosol | 25.67 | 18.05 |
| CDY71567 | Canola | cytosol | 38.5 | 17.91 |
| CDY17609 | Canola | plastid | 41.71 | 17.61 |
| CDY03069 | Canola | plastid | 41.71 | 17.49 |
| CDX72756 | Canola | cytosol | 36.9 | 16.51 |
| CDY65844 | Canola | extracellular | 21.93 | 15.36 |
| CDY32393 | Canola | mitochondrion | 18.72 | 14.96 |
| CDY70726 | Canola | cytosol | 17.65 | 14.86 |
| CDY68693 | Canola | cytosol | 36.36 | 14.14 |
| CDY56208 | Canola | nucleus | 28.88 | 13.64 |
| CDY45456 | Canola | cytosol | 16.04 | 12.77 |
| CDY43734 | Canola | mitochondrion, nucleus, plastid, vacuole | 12.83 | 12.37 |
| CDY01863 | Canola | cytosol | 13.37 | 10.04 |
Protein Annotations
| EnsemblPlants:CDY37477 | EnsemblPlantsGene:GSBRNA2T00064065001 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-assoc_dom_typ1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PFAM:PF00646 | PFAM:PF07734 |
| PFscan:PS50181 | ProteinID:CDY37477 | ProteinID:CDY37477.1 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI0004EE606C |
| UniProt:A0A078HHZ7 | MapMan:35.1 | : | : | : | : |
Description
BnaC01g37550DBnaC01g37550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHZ7]
Coordinates
chrLK032401:-:7243..8224
Molecular Weight (calculated)
21661.0 Da
IEP (calculated)
9.798
GRAVY (calculated)
-0.206
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMFNLPDE LAEEILSRVP LTSLSSVRST CRKWDTLSQN RVFGTSASAG RKQFLGFMLK DYKDKFRLLV WNPYLGQTRW IQPRNTYRSE DRNAIGYEKN
101: LNYKILRIFG EYDTKGELGS IDEHLEQLAV LHVSWVNAHA VEIWVTNKID PGAVSWIKFV RSISVFVDDL AGSFFITRKS KFLWVSI
101: LNYKILRIFG EYDTKGELGS IDEHLEQLAV LHVSWVNAHA VEIWVTNKID PGAVSWIKFV RSISVFVDDL AGSFFITRKS KFLWVSI
001: MMISDLPEDM VEEILSRVSI ISLGALRWND LSKARVICKA EARQQFAGFM IKGSKEVSNT RLVVWNPYLG KIWSIQHRSA YHSENRYTLG YDNNRKPQNL
101: EEQLAVLLHN WGAFAMEIWV TTNIEPNAKK HAVIFDSSLS CGSVACIIGE TGNLRTVDLG VAAVPYRQLP VCSYAPSLEQ INQGQELPLI GLTQIFMEQH
201: KYWVSTFLDN LITKYG
101: EEQLAVLLHN WGAFAMEIWV TTNIEPNAKK HAVIFDSSLS CGSVACIIGE TGNLRTVDLG VAAVPYRQLP VCSYAPSLEQ INQGQELPLI GLTQIFMEQH
201: KYWVSTFLDN LITKYG
Arabidopsis Description
F-box and associated interaction domains-containing protein [Source:TAIR;Acc:AT1G67455]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.